| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1704 |
|---|
| Symbol | |
|---|
| ID | 7084124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 1913753 |
|---|
| End bp | 1914955 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643698725 |
|---|
| Product | lytic murein transglycosylase |
|---|
| Protein accession | YP_002355355 |
|---|
| Protein GI | 217970121 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
|---|
| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.030456 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCCC GTCCTCTCCT GCTCGCCGCC GCGCTCGCGG CGCTCTCGCT GCCCCTGTCT
GCCGCTGCCG ACGAGGCCGC GTTCGCGTCC TGCCTCGCCA AGCTGCGCGG CGAGGCCGCG
GCCAAGGGCG TGCATGGCGA GACCTTCGAC ACCCACACGG CCGCGCTCGC GCCCGACATG
GCGGTGATCG GCTTCCTCGA CGCGCAGCCC GAGTTCGTCA CCCCGATCTG GGACTACCTC
GCCGCGCTGG TGGACGAGGA GCGCGTCGCC GACGGGCGCG CGATGCTGAC GCAGTGGAAT
GAGGTGCTCG CCGAGGTCGA GCGCCGCTAC GGCGTGGATG CCGAGACCGT GGTTGCGGTG
TGGGGCGTGG AGAGCAACTA CGGGCGCAAC TTCGGCAGCC GGCCGCTGCT GACTTCGCTG
TCCACGCTGT CCTGCTTCGG GCGCCGGCAG GCCTTCTTCC GCGGCGAATT CTTCACCACG
CTGAAGATCC TGCAGGAGGG CCACGTCGCG CCCGAGCGTC TCACCGGCTC CTGGGCGGGC
GCCTTCGGCC ACACCCAGTT CATGCCCTCG ACCTTCATGC GCCTGGCGGT GGACTTCGAC
GGCGACGGTC GCCGCGACCT CATCGACAGC GTACCCGACG CGCTCGCCTC GACCGCCAAC
TTCCTCGCGC GCGCCGGCTG GCGCAGTGAC CTGCGCTGGG GCTTCGAGGT CCGCCTGCCG
CGCGGCATGG ACACCGCCGA CGCCGGCCGG CGCAACAAGC AGCCGATGGC CGAATGGGCC
GCGCGCGGCG TGCGGCGGGC CGACGGCAGC GCCTTGCCCG CGGCCGGCGC GCCGGCCGGA
CTGATGCTGC CGGCGGGGCG CGAAGGCCCG GCCTTCCTGG TCACGCGCAA CTTCGACGCG
CTGTATTCCT ATAACGCCGC GGAGAGCTAC GGCCTCGCCA TCGCGCATCT GTCGGACCGC
CTGCGCGGCG GCGCGCCCTT CGCCACCGCC TGGCCGACCG ACGACCCCGG CCTGTCGCGT
GCCGAGCGCC GCGAGCTGCA GCGGCTGCTG ATCGCGCGCG GTCACGACAT CGGCGAGCCC
GACGGCATGA TCGGCGCGCG CACCCGCGAG GCGCTGCAGC GCGAGCAGGC CGCGCTCGGC
CTGCCGGCCG ACGGCCGCGC CGGTCAGCGC GCGCTGCAGG CGCTGCGCGC GGCGGCGCGC
TGA
|
|---|
| Protein sequence | MSSRPLLLAA ALAALSLPLS AAADEAAFAS CLAKLRGEAA AKGVHGETFD THTAALAPDM
AVIGFLDAQP EFVTPIWDYL AALVDEERVA DGRAMLTQWN EVLAEVERRY GVDAETVVAV
WGVESNYGRN FGSRPLLTSL STLSCFGRRQ AFFRGEFFTT LKILQEGHVA PERLTGSWAG
AFGHTQFMPS TFMRLAVDFD GDGRRDLIDS VPDALASTAN FLARAGWRSD LRWGFEVRLP
RGMDTADAGR RNKQPMAEWA ARGVRRADGS ALPAAGAPAG LMLPAGREGP AFLVTRNFDA
LYSYNAAESY GLAIAHLSDR LRGGAPFATA WPTDDPGLSR AERRELQRLL IARGHDIGEP
DGMIGARTRE ALQREQAALG LPADGRAGQR ALQALRAAAR
|
|---|
| |