Gene Tmz1t_1696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1696 
Symbol 
ID7084116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp1903510 
End bp1905609 
Gene Length2100 bp 
Protein Length699 aa 
Translation table11 
GC content67% 
IMG OID643698717 
Productpolynucleotide phosphorylase/polyadenylase 
Protein accessionYP_002355347 
Protein GI217970113 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) 
TIGRFAM ID[TIGR03591] polyribonucleotide nucleotidyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.49299e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCTACCG CAATCAAGAA AACCTTCGCC TACGGCGCCC ACACCGTGAC CCTGGAAACC 
GGCGAAGTCG CCCGCCAGGC TGGCGGCGCC GTCATCGTGA ACATGGACGA GACCGTGGTG
CTGGCCACCG TGGTCGGCGC CAAGGAAGCC CGCCCGGGCC AGGACTTCTT CCCGCTCACC
GTCGACTACG TCGAGAAGTT CTATGCCGCG GGCCGTATCC CCGGCGGCTT CTTCAAGCGT
GAAGGCCGCC CGAGCGAGAA GGAGATCCTC ACCTCGCGCC TGATCGACCG TCCGATCCGC
CCGCTCTTCC CCGACGGCTT CATGAATGAA GTCCAGGTCA TCGTCACCGT GCTGTCGCTG
AACCCCGAGA TCGACTCCGA CATCCCGGCG ATGATCGGTG CCTCGGCCGC GCTGGCGATC
TCCGGCCTGC CCTTCAACGG CCCGGTCGGC GCCGCGCGCG TCGGCTACCT CGATGGCAAG
TACATCCTCA ACCCGACCGC CACCGAGCTG CAGTCGAGCG CGATGAACCT CGTCGTCGCC
GGCACCCAGA CCGCCGTGCT GATGGTCGAG TCCGAAGCCC AGGAGCTGCC CGAGGATGTC
ATGCTCGGCG CCGTGGTGTT CGGCCACGAG CAGATGCAGA CCGCCATCAA GGCCATCAAC
GATCTCGTCG AGGTTGCCGG CAAGCCCGAA TGGGACTGGC AGGCGCCGCC CGCCAATGCG
GCGCTGATCG CCAAGGTCAC CGAGCTCGCC AAGGCCGAGA TGGAAGAGGC CTTCCGCATC
ACCAGCAAGC AGGAGCGCTC GGCCCGCCTG TCCGAGATCC GCAAGCGCGT GATCGGCCAG
CTCACCGAAG GCGTGGAGAA CGCGCCCTCG GTCAATGAAC TGAAGGACCT CTTCTTCAAC
CTCGAGTCGG GCATCGTCCG CAGCCGCATC CTCAACGGCG AGCCGCGCAT CGACGGCCGC
GACACCCGCA CCGTGCGTCC GATCGAGATC CGCACCGGCG TGCTGCCGCG CACCCACGGC
TCGGCGCTGT TCACCCGCGG CGAGACGCAG GCCCTGGTGG TCGCCACCCT GGGCACCGGC
CGCGACGAGC AGATCATCGA CGCCATCGCC GGCGAGTACA AGGAGCGCTT CCTGCTCCAC
TACAACTTCC CGCCCTTCTG CACCGGCGAG ACCGGCCGCT TCGGCATCAC CAAGCGCCGC
GAGGTCGGCC ACGGCCGCCT GGCCAAGCGC TCGCTTGTCG CCATGCTGCC CAAGCCGGAA
GAGTTCTCCT ACACCGTGCG CGTGGTCTCC GAGATCACCG AATCCAACGG CTCCTCGTCG
ATGGCCTCGG TGTGCGGCGG CTCGCTCGCC ATGATGGACG CCGGCGTGCC GCTGAAGAAC
CACGTCGCCG GCATCGCCAT GGGTCTGATC AAGGACGGCA ACCGCTTCGC GGTACTGACC
GACATCCTGG GCGACGAGGA CCACCTCGGC GACATGGACT TCAAGGTCGC CGGTACCGAG
AACGGCATCA CCGGCCTGCA GATGGACATC AAGATCCAGG GCATCACCAA GGAGATCATG
CACGCCGCGC TGGAGCAGGC CAAGGAAGGC CGCCTGCACA TCCTCGGCCT CATGCAGCAG
GCCCTGGGCA CCAGCCGCGG CCAGGTGTCC GAGTACGCTC CGCGCATGAT CAACATGAAG
ATCAATCCCG AGAAGATCCG CGACGTGATC GGCAAGGGCG GCGCGGTGAT CCGCGCGCTG
CAGGAAGAGA CCGGCACCGT GATCGAGATC GAGGACGACG GTTCGGTCAA GATCTCGTCG
GTCAGCGCCG AGGGCGCCCA GGCGGCGAAG GCCAGGATCG AGGCGATCAC CGCCGAGGTC
GAGGTCGGCA AGGTCTACGA AGGTCCGGTC GTGCGTCTGC TCGACTTCGG CGCCATCGTG
AACATCATGC CGGGCCGCGA CGGCCTGCTG CACGTGTCGC AGATCGCCAA CGAGCGCGTG
AATAACGTCT CGGACTACGT CAAGGAAGGC CAGGTCGTGC GCGTGAAGGT CCTCGAGACC
GACGAGCGCG GCAAGATCCG CCTGAGCATG AAGGCGCTGC TGAACGAAAA CGCCGGCTGA
 
Protein sequence
MPTAIKKTFA YGAHTVTLET GEVARQAGGA VIVNMDETVV LATVVGAKEA RPGQDFFPLT 
VDYVEKFYAA GRIPGGFFKR EGRPSEKEIL TSRLIDRPIR PLFPDGFMNE VQVIVTVLSL
NPEIDSDIPA MIGASAALAI SGLPFNGPVG AARVGYLDGK YILNPTATEL QSSAMNLVVA
GTQTAVLMVE SEAQELPEDV MLGAVVFGHE QMQTAIKAIN DLVEVAGKPE WDWQAPPANA
ALIAKVTELA KAEMEEAFRI TSKQERSARL SEIRKRVIGQ LTEGVENAPS VNELKDLFFN
LESGIVRSRI LNGEPRIDGR DTRTVRPIEI RTGVLPRTHG SALFTRGETQ ALVVATLGTG
RDEQIIDAIA GEYKERFLLH YNFPPFCTGE TGRFGITKRR EVGHGRLAKR SLVAMLPKPE
EFSYTVRVVS EITESNGSSS MASVCGGSLA MMDAGVPLKN HVAGIAMGLI KDGNRFAVLT
DILGDEDHLG DMDFKVAGTE NGITGLQMDI KIQGITKEIM HAALEQAKEG RLHILGLMQQ
ALGTSRGQVS EYAPRMINMK INPEKIRDVI GKGGAVIRAL QEETGTVIEI EDDGSVKISS
VSAEGAQAAK ARIEAITAEV EVGKVYEGPV VRLLDFGAIV NIMPGRDGLL HVSQIANERV
NNVSDYVKEG QVVRVKVLET DERGKIRLSM KALLNENAG