| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1694 |
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| Symbol | truB |
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| ID | 7084114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 1901958 |
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| End bp | 1902944 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643698715 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_002355345 |
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| Protein GI | 217970111 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00112277 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTCG CTCCCGCGGC TGAGGTCGCG GCTGAGCCGG CGCGGCCGAA GCGCAAGGGC
CAGCCGCAAC GCAGGATCGT CCGCCGCGAA GTCGACGGCG TGCTGTTGCT CGACAAGCCG
CAGGGCATGA GCTCGAACGG TGCCTTGCAG ACCGCACGGC GCTTGCTTGC GGCCGCCAAG
GCCGGCCACA CCGGCACGCT GGATCCGATG GCGAGCGGAC TGCTGCCGCT CACCTTCGGC
GAGGCCACCA AGTTCGCGCA GATGCTGCTC GACGCCGACA AGACCTACGA GGCGGTGGTG
CGGCTCGGCG TGGACACCGA CAGCGGCGAT GCCGAGGGCA AGGTGCTCGC CACCCGTCCG
GTGGCGGTGG ATCGCGCCGC GCTCGAAGCC GTGCTGGAGC GCTTCCGCGG CGAGATCGAG
CAGGTGCCGC CGATGTATTC GGCGCTCAAG CGCGACGGCA AGGCGCTCTA CGAGTACGCG
CGCGCGGGCA TCGAGCTCGA GCGCGCGGCG CGCCGGGTCG TGATCCATGC GCTCGAACTG
CTCGACTTCG CAGGCGAGCG CTTCACGATC CGCGTGCATT GCAGCAAGGG CACCTACATC
CGCAGCCTCG CGATGGACAT CGGCGCTGCG CTCGGTTGCG GTGCCCACCT GGCGGCGTTG
CGGCGCACCG CGATCGGCGC CTTCGACCTG TCCGGTGCGC TCACGCTCGA AGCGCTGGAG
GCGGCCGGCG AGGGCGGACG CGATGCGCTG CTCGCCCCGG TCGATGCGCT GGTGGCGGGC
TTTCCGGTGC TGCAGCTCGA TGCCGAGGCG GCGCGCGGCC TGCTGCAGGG TCGCACGCTC
GCGCTCGCGG GCGCGCAGCC GGGCGCGAAG GTGCGCGCCT ACGGGCCGGG GGGCTTCCTC
GGCCTGGCGC AGTGGCAGGA CGACGGACGC CTGGCGGCGC GCCGGCTGAT CGCCACCGGT
GGGCGGAGCG AAGATGCATC CGCATGA
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| Protein sequence | MTLAPAAEVA AEPARPKRKG QPQRRIVRRE VDGVLLLDKP QGMSSNGALQ TARRLLAAAK
AGHTGTLDPM ASGLLPLTFG EATKFAQMLL DADKTYEAVV RLGVDTDSGD AEGKVLATRP
VAVDRAALEA VLERFRGEIE QVPPMYSALK RDGKALYEYA RAGIELERAA RRVVIHALEL
LDFAGERFTI RVHCSKGTYI RSLAMDIGAA LGCGAHLAAL RRTAIGAFDL SGALTLEALE
AAGEGGRDAL LAPVDALVAG FPVLQLDAEA ARGLLQGRTL ALAGAQPGAK VRAYGPGGFL
GLAQWQDDGR LAARRLIATG GRSEDASA
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