| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1680 |
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| Symbol | |
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| ID | 7084100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 1886270 |
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| End bp | 1888303 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643698701 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_002355331 |
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| Protein GI | 217970097 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.139881 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAAG CTCCCCGCCC CGAATCCGCC CCCGCCGAAG CCGAACTGCG CTTCGCCGAT
CTCCAGCTGC CCGCGCCCCT GCTGTCGGCG CTCGCCGAAG TGGGTTACGA GACCCCCTCG
CCGATCCAGG CCGCCTGCAT CCCGCAACTG CTCGCCGGCC ACGACATCCT CGGCGAGGCG
CAGACCGGGA CCGGCAAGAC CGCCGCCTTC GCGCTGCCGA TGCTGGCCAA GCTCGACCTC
GCCGACACGC GCCCGCAGGT CCTGGTGCTC ACCCCCACGC GCGAGCTAGC GATCCAGGTC
GCCGAGGCCT TCGCCAAGTA CGCCCACCAC CTGAAGAACT TCCACGTGCT GCCGATCTAC
GGCGGCCAGA GCATGGTCGT TCAGCTGCGC CAGCTCTCGC GCGGCGCCCA GGTGGTCGTC
GGCACCCCGG GCCGGGTCAT GGACCACCTC GAGCGCGAGA GCCTCAAGCT CGACGCCCTC
AAGGCCATCG TGCTCGACGA GGCCGACGAG ATGCTGCGCA TGGGCTTCAT CGACGATGTC
GAGTGGATCC TCGAGCACAC CCCGGCCGAG CGCCAGACCG CGCTGTTCTC GGCCACCATG
CCCAACGTGA TCCGCGAAGT CGCCCGCCGC CACCTGCGCA ACCCGCAGGA GATCAAGATC
CGCGCCGCCA CCTCCACCGT GGCCAAGATC AGCCAGCGCT ACTGGCTGGT GCGCGGGGTG
GACAAGCTCG ACGCACTCAC CCGCATCCTC GACGCCGAGG AAAGCTTCGA CGCCGCCCTC
GTCTTCGTGC GCACCAAGAT CGCCACCGAG GAGCTCGCCG ACAAGCTGGC CGCGCGCGGC
TATGCCGCCG CCGCGCTCAA CGGCGACATG AACCAGGGCC TGCGCGAGCG CGTGATCGAG
CAATTGAAGA ACGGCGCGCT CGACATCGTC ATCGCCACCG ACGTCGCCGC GCGCGGCATC
GACGTGCCGC GCGTCTCGCA CGTGATCAAC TACGACATCC CCTACGACAC CGAGGCCTAC
GTGCACCGCA TCGGCCGCAC CGGCCGCGCC GGGCGCGAGG GGGTGGCGAT CCTGTTCGTG
GCGCCGCGCG AGACGCGCAT GCTCAAGATG ATCGAGCGCG CCACCCGCCA GCCGATCACG
CCGATCGCGC TGCCGAGCGG TGAGGAGGTC ACCAACCTGC GCGTGGCCCA GTTCAAGCGC
CAGGTCGCCG AGACCATCGC CGGCGCGGAG CTCGGCTTCT TCATGGGCGT GGTCAACGAC
CTGATCGACG AGAACGAGCT CGAGATCCAC GAGGTCGCCG CCGCACTGGC CCTGCTCGCC
CAGCGCGAGC GCCCGCTCCA GGTCGAGCAG TCCGGCCGCG GCTGGGACAT CGCCACCACG
ACGCCCAGTG AAGGCCGCGC GCCGCGCGCC GAGCACTTCA CCACCGGCGC CGCGCGCGAG
CGCACGCCGC GCCCCAACCG CGACGAGATC CTCGCCCGCC GGCGTTCCTT CTCCGAAGGC
GCGCTGGTGC GCTACCGCAT CGAGGTCGGC CGCGCCCATG GCGCGAGCCC CAAGGAGATC
GTCGGCGCGA TCGCCAACGA AGGCGGCATC GAGGGCAGGT TCATCGGCCA GATCCACCTC
TTCGACGAGT TCTCCACCGT CGAGCTGCCC GCCAACCTGC CCGAGGACCT GCTCGCCACG
CTCAAGCGCA CCCGCGTGCG CCAGATGCCG CTGTCGATCC GCGAGCTGAG CGCCGCCGAG
GCGGCCACGG TCCCCGAACG CCGGCGCCCG GCGCGGCCGG AACGCGGCAC GGACGGCTCG
CACGCGCAGG ACGGCGAGCG CCGCCCGCGC GACTTCGGTG GCGCGCGCCC GAACCAGCCT
GGCGCGGGTT ACGTCGGCAA GCCGGGTGGC GGGGGCTTTC GCGGCCACGA CGAGCGTCGA
CCGCACGACG AACGCCGCCC GCCGGCCACC GACCGCAAGG CTGGCGGCCA CTCCGCGCCG
GTGAAGCGCC AGGGCGAGCG TGCCGGCAAG CCCTTCCGCC GCCGCGAGGA CTGA
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| Protein sequence | MTEAPRPESA PAEAELRFAD LQLPAPLLSA LAEVGYETPS PIQAACIPQL LAGHDILGEA
QTGTGKTAAF ALPMLAKLDL ADTRPQVLVL TPTRELAIQV AEAFAKYAHH LKNFHVLPIY
GGQSMVVQLR QLSRGAQVVV GTPGRVMDHL ERESLKLDAL KAIVLDEADE MLRMGFIDDV
EWILEHTPAE RQTALFSATM PNVIREVARR HLRNPQEIKI RAATSTVAKI SQRYWLVRGV
DKLDALTRIL DAEESFDAAL VFVRTKIATE ELADKLAARG YAAAALNGDM NQGLRERVIE
QLKNGALDIV IATDVAARGI DVPRVSHVIN YDIPYDTEAY VHRIGRTGRA GREGVAILFV
APRETRMLKM IERATRQPIT PIALPSGEEV TNLRVAQFKR QVAETIAGAE LGFFMGVVND
LIDENELEIH EVAAALALLA QRERPLQVEQ SGRGWDIATT TPSEGRAPRA EHFTTGAARE
RTPRPNRDEI LARRRSFSEG ALVRYRIEVG RAHGASPKEI VGAIANEGGI EGRFIGQIHL
FDEFSTVELP ANLPEDLLAT LKRTRVRQMP LSIRELSAAE AATVPERRRP ARPERGTDGS
HAQDGERRPR DFGGARPNQP GAGYVGKPGG GGFRGHDERR PHDERRPPAT DRKAGGHSAP
VKRQGERAGK PFRRRED
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