Gene Tmz1t_1651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1651 
Symbol 
ID7084070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp1852091 
End bp1853059 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content67% 
IMG OID643698671 
ProductTrans-hexaprenyltranstransferase 
Protein accessionYP_002355302 
Protein GI217970068 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00299697 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCCGTCC AGCAGCTCTT CGCGCCGATC GCCGCCGACA TGCAAGCGGT GGATACGGTC 
ATCCGCAACC GACTGCACTC GGACGTGGCC CTGATCCGCC GCATCGCGGA ATACATCGTC
GGCAGCGGCG GCAAGCGGCT GCGCCCCGCG CTGGTGCTCT ACGCGGCGGG CGCGCTCGAC
TATCGCGGCG TGCATCACCA CGAGCTCGCC GCGGTCGTCG AGTTCATCCA CACCGCCAGC
CTGCTGCACG ACGACGTCGT CGACGAGTCC GACCTGCGCC GCGGCAAGCG TACCGCCAAC
GCCGCCTTCG GCAACGCCTC TGCCGTGCTG GTGGGCGACT TCCTCTATTC GCGTGCCTTC
CAGATGATGG TCGGGGTCGA CGAGATGCGC GTGATGCGCG TGCTCGCCGA CGCCACCAAC
ATCATCGCCG AGGGCGAGGT GCTGCAGCTG CTCAACTGCC ACAACGCCGA CGTCGTCATC
GAAGACTACC TGCGCGTGAT CCGCTACAAG ACCGCCAAGC TCTTCGAGGC CGCGGCGCGC
CTGGGCGGCA TCGTGGCCGG TGCGGACGAC GCGCTCGAGC AGCGCCTGGC CGCCTTTGGC
ATGCACCTTG GCACCGCCTT CCAACTCATC GACGACGTGC TCGACTACTC CGCCGACGAG
GCCGACACCG GCAAGCACCT TGGGGACGAC CTCGCCGAAG GCAAGCCGAC GCTGCCGCTG
ATCCACGTGA TGCAGCATGG CACGGCGGAG CAGGGCGCGC TGGTGCGTCA CGCGATCGAA
GGCGGCGGCC GCGGCGATTT CGCGGCCGTG CTCGCGGCGA TCCAGTCGAC CGGCGCGCTC
GAAGAGACGC GCCGCTACGC GGAAGCGGAG GCGAAGCTCG CAATCGACGC GATTTCGGTG
CTTCCCCCTT CCATTTTCAA GGAAGCGCTG CTACAATTAT CGGACTTTGC AGTTCGGCGA
AAACACTGA
 
Protein sequence
MSVQQLFAPI AADMQAVDTV IRNRLHSDVA LIRRIAEYIV GSGGKRLRPA LVLYAAGALD 
YRGVHHHELA AVVEFIHTAS LLHDDVVDES DLRRGKRTAN AAFGNASAVL VGDFLYSRAF
QMMVGVDEMR VMRVLADATN IIAEGEVLQL LNCHNADVVI EDYLRVIRYK TAKLFEAAAR
LGGIVAGADD ALEQRLAAFG MHLGTAFQLI DDVLDYSADE ADTGKHLGDD LAEGKPTLPL
IHVMQHGTAE QGALVRHAIE GGGRGDFAAV LAAIQSTGAL EETRRYAEAE AKLAIDAISV
LPPSIFKEAL LQLSDFAVRR KH