Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_1609 |
Symbol | |
ID | 7084819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 1804110 |
End bp | 1805327 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643698629 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002355260 |
Protein GI | 217970026 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0283587 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTCTTCT CGTCTTCCTC CCTTCCCGTC TTCCTGCGCC GCCCCGCGGT CGTCATGGCC TGCGGCGCGC TGATCCTCAC GCTGGCCATG GGCGTGCGCC ACACCGGCGG CCTGTTCCTG CAGCCGATGA CGCTCGACCA CGGCTGGTCG CGCGAGCTGT TCTCCTTCTC GATCGCGCTG CAGAACCTGC TGTGGGGCGT GTTCCAGCCC TTCGCCGGCG CCTTCGCCGA CCGCCACGGC GCCGGCCGCA CCCTGGTGGG CGGGGCGCTG CTCTACATCC TGGGCCTGGT GATCATGGCT CACGCCGACA GCGCGCTCGG CCTCAACCTC GGCGCCGGCC TGCTGATCGG CATGGGCCTC TCGGGCACCA CCTTCAGCGT GGTGCTGGGC GTGATCGGGC GCATGGCCGC GCCGGAGAAG CGCAGCCTCG CGCTCGGCAT CGCCTCGGCC GGCGGCAGCT TCGGCCAGTT CGCGGTGCTG CCGGTGGGAC AGGGGCTGAT CACCGCCTTC GGCTGGCAGG ACGCGCTGCT GTGGATGGCG GTGGGCATCG CCTTCATCAT CCCGCTCGCC GCCGCGGTCA CCGGCACCAG CGAGCGCGGC GGCGGTGTCG AACAGTCGCT GCGCCAGGCG CTCGCCGAGG CGATGCGCAC GCCGAGCTTC CACTTCCTGT TCTGGAGCTT CTTCGTGTGC GGCTTCCAGA CCGCCTTCGT CATGCTGCAT CTGCCCGCCT ACGTGGTCGA CATGGGTCTG TCGGCCAACA TCGGCATGAG CGCGGTGGCG ATGATCGGGC TGTTCAACAT CTTCGGCTCC TTCCTGTCGG GCTGGCTGGG CGGCCTCTAC AGCAAGAAGT GGCTGCTGGC GTGGATCTAC GCGTTGCGTA TCGTGGCCAT CCTGGCGCTG ATGCTGTTCC CGCTCAGCCC GCTCACGCTC TACGTCTTCG CCGCGGTGAT GGGCCTGCTG TGGCTGGGCA CGGTGCCGCT CACCAGCGGC CTGGTCGGCC ACATCTTCGG CCTGCGCTAC GTCGGCATGC TGTACGGCAT CGTCTTCCTC GGCCACCAGA TCGGCGGCTT CCTGGGGGCC TGGCTGGGCG GGCGCATCTT CGACCTCAGC GGCTCGTACG AGATGGCGTG GTGGCTGTCG ATCGCGCTCT CGGTGATGGC GGCGGCGCTG TCGCTGCCGG TGCGCGAGGC GCCGCTCGCA AGGCTGGCGG CGCGATGA
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Protein sequence | MLFSSSSLPV FLRRPAVVMA CGALILTLAM GVRHTGGLFL QPMTLDHGWS RELFSFSIAL QNLLWGVFQP FAGAFADRHG AGRTLVGGAL LYILGLVIMA HADSALGLNL GAGLLIGMGL SGTTFSVVLG VIGRMAAPEK RSLALGIASA GGSFGQFAVL PVGQGLITAF GWQDALLWMA VGIAFIIPLA AAVTGTSERG GGVEQSLRQA LAEAMRTPSF HFLFWSFFVC GFQTAFVMLH LPAYVVDMGL SANIGMSAVA MIGLFNIFGS FLSGWLGGLY SKKWLLAWIY ALRIVAILAL MLFPLSPLTL YVFAAVMGLL WLGTVPLTSG LVGHIFGLRY VGMLYGIVFL GHQIGGFLGA WLGGRIFDLS GSYEMAWWLS IALSVMAAAL SLPVREAPLA RLAAR
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