Gene Tmz1t_1605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1605 
Symbol 
ID7084815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp1799913 
End bp1801847 
Gene Length1935 bp 
Protein Length644 aa 
Translation table11 
GC content71% 
IMG OID643698625 
ProductABC transporter related 
Protein accessionYP_002355256 
Protein GI217970022 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0890354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCTCC TCGCCGTAGA TAACGCCTGC CTCGCCTTCG GTCACGTCGA CCTGCTCGAT 
CACGTGAGCT TCCAGCTCGA CGCCGGGGAG CGCGTGGCGC TCATCGGGCG CAACGGCTCG
GGCAAGTCCA GCCTCCTGCG CGCGCTCGCC GGCCAGGCAG CGCTCGATGA TGGCACAGTG
TGGCGGCAGG CTGAAATGGT CGCGGCATAC GTGCCGCAGG AGCCGGATTT CGAGCTCGGG
CGCGACGTCT TCGAGACCAT CGCCGACGGC CTGGGCGCCG CCGCCCGCCT GCTCGTCGAC
TACCATGCTG CCATGCTGGA GGTCGCCGAG CACGCCAGCC CCGAGGCCAT GGCCCGGCTG
GACGCCCTGC AGCATGCGGT CGAGGCCGCG GGCGGCTGGC GGCTCAACCA GCGCGTCGAG
CAGGTGGTCG CCCGACTCGG ACTCGACCCG GCGGCAAAGG TTTCCAGCCT CTCCGGCGGC
GGCGTCAAGC GTGTGGCGCT GGCGCGCGCG CTGGTCGCCG AGCCCGACCT GCTGCTGCTC
GACGAACCCA CCAACCACCT CGACCTCGAC GGCATCCTGT GGCTCGAAGG GCTGATCCGC
GACTTCCGCG GTGCCGTCAT CGTCATCACC CACGACCGCG TCTTCCTCGA CAACGTCGCC
ACCCGCATCA TCGAGCTCGA CCGCGGCCGG CTGGCGAGCT ACCCGGGGCG CTTCTCCGAC
TACCAGCGCC GCAAGGCGGA AGAGCTCGAA GCCGAGGAGA AGGCCGCCGC GCGCTTCGAC
AAGTTCCTCG CCCAGGAGGA GGTGTGGATC CGCAAGGGCG TGGAGGCCCG GCGCACCCGC
AACGAAGGCC GCGTGCGTCG GCTCGAGGCC CTGCGCAACG CGCGCGCCGC GCGTCGCGAC
CGCCTCGGCG ACGTCAGCCT GGCGGTCGAC ACCGGCGACA AGAGCGGCCA GATGGTCGCG
GAGCTCACCG ACGTCTCCAA GCGCTACGGC GACAAGGTGG TGGTGCGCGA TTTCTCCACC
CGCATCCTGC GCGGCGATCG CATCGGCTTC ATCGGCCCCA ACGGCGCCGG CAAGACCACG
CTGTTGAAGC TCATCCTCGG CGAGGTCGAG CCCGACGCGG GCACGGTGCG CCGCGGCACC
CGGCAGACGG TGGCCTATTT CGACCAGCTG CGCGCCCAGC TCGACCCCGA GCTGCCGCTC
ACCGAGGTCA TCAGCCCGGG CTCGGATTTC GTCGAGATCG GCGGCGAGAA GAAGCACGTC
ATCGGCTACC TCGGCGACTT CCTGTTCGCG CCGCAGCGCG CGCGCTCACC GGTCAAGTCG
CTCTCCGGCG GCGAGCGCAA CCGCCTGCTG CTGGCGCGTC TGTTCGCCCG CCCGGCCAAC
GTGCTGGTGC TCGACGAGCC CACCAACGAC CTCGACATCG AGACCCTCGA CCTGCTGGAG
GAGCTGCTTG CCGGCTACGA CGGCACGCTC TTCCTCGTCA GCCACGACCG CGCCTTCCTC
GACAACGTGG TCACCCAGGT GATCGCCGCC GAGGGCGACG GGCGTTGGAG CGAATACGCC
GGCGGCTACG GCGACTGGCA GCGCGTTCAG GCACGGCGTG CCGAGGAGGC TGCCGCGCGC
GAGGCGACGG CGCGCGAGAG CGTCAGGCGC AGCGCTCCGC CCGCGGACAA GGCGCGCGCC
GCCGAGCCCA AGGCCGCGAA CCGCCCGACC AAGCTGTCCT TCAACGAAAA GCGCGAGCTC
GAGGCCTTGC CCGAGCGCAT CGCCGCGCTC GAGGACGAGC AGACCGCGTT GCACGCGCGC
ATGGCCGACC CGGCGCTGTA CCAGAACGCC CCGCAGGAGG TCGCGCAGAT CAAGGCGCGG
ATGGAGGCGC TGGACGGCGA GATCGAGACC GCGATGCTGC GCTGGGAAGA GCTCGAGTCG
CGCGCGGCAG GTTGA
 
Protein sequence
MPLLAVDNAC LAFGHVDLLD HVSFQLDAGE RVALIGRNGS GKSSLLRALA GQAALDDGTV 
WRQAEMVAAY VPQEPDFELG RDVFETIADG LGAAARLLVD YHAAMLEVAE HASPEAMARL
DALQHAVEAA GGWRLNQRVE QVVARLGLDP AAKVSSLSGG GVKRVALARA LVAEPDLLLL
DEPTNHLDLD GILWLEGLIR DFRGAVIVIT HDRVFLDNVA TRIIELDRGR LASYPGRFSD
YQRRKAEELE AEEKAAARFD KFLAQEEVWI RKGVEARRTR NEGRVRRLEA LRNARAARRD
RLGDVSLAVD TGDKSGQMVA ELTDVSKRYG DKVVVRDFST RILRGDRIGF IGPNGAGKTT
LLKLILGEVE PDAGTVRRGT RQTVAYFDQL RAQLDPELPL TEVISPGSDF VEIGGEKKHV
IGYLGDFLFA PQRARSPVKS LSGGERNRLL LARLFARPAN VLVLDEPTND LDIETLDLLE
ELLAGYDGTL FLVSHDRAFL DNVVTQVIAA EGDGRWSEYA GGYGDWQRVQ ARRAEEAAAR
EATARESVRR SAPPADKARA AEPKAANRPT KLSFNEKREL EALPERIAAL EDEQTALHAR
MADPALYQNA PQEVAQIKAR MEALDGEIET AMLRWEELES RAAG