| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1590 |
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| Symbol | |
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| ID | 7084794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 1773613 |
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| End bp | 1775856 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643698607 |
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| Product | Lysine decarboxylase |
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| Protein accession | YP_002355244 |
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| Protein GI | 217970010 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.334363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTCC ACTTCCCCAT CATCATCATC GACGAGGACT TCCGCTCGGA GAACACCTCG
GGACTGGGGA TCCGCGCGCT CGCCAAGGCG ATCGAGGAAG AGGGCATGGA AGTGCTCGGC
GTCACCAGCT ACGGCGACCT GACGTCCTTC GCGCAGCAGC AGAGCCGTGG CTCGACCTTC
ATCCTGTCGA TCGACGACGA GGAGTTCTCC TCGCCCGAGG CCTCGGCCAA GGCGATCGCC
GACCTGCGCG CGTTTGTCGT CGAGATCCGC TTCCGCAACG CCGACATCCC GATCTTCCTG
CACGGCGAGA CGCGCACCAC GCGCCACATC CCCAACGACG TGCTGCGCGA GATGCACGGC
TTCATCCACA TGTTCGAGGA CACGCCGGAG TTCATCGCGC GCTACGTGGT GCGCGAGGCG
AAGAACTATC TCGATTCGCT GGCGCCGCCC TTCTTCCGCG CGCTGGTGCA CTACGCGGCC
GACAGCTCGT ACTCGTGGCA CTGCCCGGGG CACTCGGGTG GCGTTGCTTT TCTGAAAAGC
CCGGTGGGGC AGATGTTCCA CCAGTTCTTC GGCGAGAACA TGCTGCGCGC GGACGTGTGC
AATGCGGTCG ACGAACTCGG CCAGCTGCTC GACCACACCG GGCCGGTGGC GGCCTCGGAG
CGCAACGCGG CGCGCATCTT CAACTGCGAC CACCTGTACT TCGTCACCAA CGGCACGTCG
ACGTCGAACA AGATGGTCTG GCACACCACG GTGGCGCCCG GCGACATCGT GGTCGTCGAC
CGCAACTGCC ACAAGTCCAT CCTCCACTCG ATCATCATGA CCGGCGCGGT GCCGGTGTTC
CTGACGCCGA CGCGCAACCA CTACGGCATC ATCGGCCCGA TCCCGCTGGA GGAGTTCTCA
ATGGAGAACA TCCGCAAGAA GATCGAGGCC AACCCCTTCG CGCGCGAGGC GAAGAACAAG
AAGCCGCGCA TCCTCACCAT CACCCAGTCG ACCTACGACG GCGTGGTGTA CAACGTCGAG
GCCATCAAGG AGCTGCTCGA CGGCGAGATC GACACCCTGC ACTTCGATGA AGCCTGGCTG
CCGCACGCCG CCTTCCACGA CTTCTACGGC GACTATCACG CGATCGGCGC CGATCGTCCG
CGCTGCCGCG AGTCGATGGT GTTCGCCACC CAGTCCACCC ACAAGCTGCT CGCCGGACTC
AGCCAGGCCT CGCAGATCCT GGTGCAGGAC TCGCAGACCC GCAGGCTCGA CCGCGACATC
TTCAACGAGG CCTACCTCAT GCATACCTCG ACCTCGCCGC AGTACGCGAT CATCGCGTCC
TGTGACGTGG CGGCGGCGAT GATGGAGGCG CCGGGCGGCA CCGCACTGGT CAATGAATCG
CTCTCCGAGG CGGTGGAGTT CCGTCGCGCG ATGCGCAAGG TGGACGCCGA ATTCGGCGAC
GACGAATGGT GGTTCCAGGT CTGGGGGCCG GAGTACCTGG CCGAGGAGGG CATCGGCGAG
CGCGACGACT GGACGCTGAA GGCCGGCGAG CGCTGGCATG GCTTCGGCAA CCTGGCCGAG
GGCTTCAACA TCCTCGACCC GATCAAGGCA ACGATCATCA CCCCGGGCCT GAACATGGAC
GGCGACTTCG CCGAACACAC CGGCATCCCG GCGGCGATCG TCACCAAGTA CCTCGCGGAG
CACGGCATCA TCGTCGAGAA GACCGGCCTG TACTCCTTCT TCATCATGTT CACCATCGGC
ATCACCAAGG GCCGCTGGAA TACGATGGTG ACCGAGCTGC AGCAGTTCAA GGACGACTAC
GACCGCAACC AGCCGCTGTG GCGCGTGATG CCCGAATTCA TCGCCAAGCA TCCGCGCTAC
GAGCGCGTCG GGCTCAAGGA TCTGTGCGAC CAGATCCACA GCTTCTACAA GGCCAACGAC
GTCGCCCGAC TGACCACCGA GATGTATCTG TCGGACATGG TGCCGGCGAT GAAGCCCGCC
GACGCCTTCG CCAAGATGGC GCACCGCGAG ATCGAGCGCG TGGCGCTCGA CGAGCTCGAG
GGCCGCGTCA CCGCGATGCT GGTCACGCCC TATCCGCCGG GCATCCCGCT GCTGATCCCG
GGCGAGCGCT TCAACGCGAC GATCGTGCGC TACCTCAAGT TCGCGCGCGA CTTCAACGCC
CGCTTCCCCG GCTTCGAGAC CGACATCCAC GGCCTGGTCA AGGGCGAGGA CGGGCGCTAC
CACGTGGATT GCGTGAAGGG CTGA
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| Protein sequence | MRFHFPIIII DEDFRSENTS GLGIRALAKA IEEEGMEVLG VTSYGDLTSF AQQQSRGSTF
ILSIDDEEFS SPEASAKAIA DLRAFVVEIR FRNADIPIFL HGETRTTRHI PNDVLREMHG
FIHMFEDTPE FIARYVVREA KNYLDSLAPP FFRALVHYAA DSSYSWHCPG HSGGVAFLKS
PVGQMFHQFF GENMLRADVC NAVDELGQLL DHTGPVAASE RNAARIFNCD HLYFVTNGTS
TSNKMVWHTT VAPGDIVVVD RNCHKSILHS IIMTGAVPVF LTPTRNHYGI IGPIPLEEFS
MENIRKKIEA NPFAREAKNK KPRILTITQS TYDGVVYNVE AIKELLDGEI DTLHFDEAWL
PHAAFHDFYG DYHAIGADRP RCRESMVFAT QSTHKLLAGL SQASQILVQD SQTRRLDRDI
FNEAYLMHTS TSPQYAIIAS CDVAAAMMEA PGGTALVNES LSEAVEFRRA MRKVDAEFGD
DEWWFQVWGP EYLAEEGIGE RDDWTLKAGE RWHGFGNLAE GFNILDPIKA TIITPGLNMD
GDFAEHTGIP AAIVTKYLAE HGIIVEKTGL YSFFIMFTIG ITKGRWNTMV TELQQFKDDY
DRNQPLWRVM PEFIAKHPRY ERVGLKDLCD QIHSFYKAND VARLTTEMYL SDMVPAMKPA
DAFAKMAHRE IERVALDELE GRVTAMLVTP YPPGIPLLIP GERFNATIVR YLKFARDFNA
RFPGFETDIH GLVKGEDGRY HVDCVKG
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