| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1571 |
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| Symbol | alaS |
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| ID | 7084775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 1747573 |
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| End bp | 1750194 |
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| Gene Length | 2622 bp |
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| Protein Length | 873 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643698588 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_002355225 |
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| Protein GI | 217969991 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCCG CCGAAATCCG CGACGCCTTC CTCAAGTTCT TCGAATCCAA GGGCCACCAG
ATCGTGGCCT CCAGCTCGCT CGTGCCGCAC GAAGACCCGA CGCTGCTGTT CACCAACGCC
GGCATGAACC AGTTCAAGGA CGTGTTCCTC GGCTTCGACA AGCGTCCCTA CACCCGCGCC
ACCACCTCGC AGAAGTGCGT GCGCGCCGGC GGCAAGCACA ACGACCTCGA GAACGTCGGC
TACACCGCGC GCCACCACAC CTTCTTCGAG ATGCTCGGCA ACTTCAGCTT CGGCGACTAC
TTCAAGCGCG ACGCCATCGC CTACGCCTGG GAGCTGCTGA CCGAGGTCTT CAAGCTGCCC
AAGGACAAGC TCTGGGTCAC GGTGTACGCC GAGGACGACG AGGCCTACGA CATCTGGACC
AAGGAGGTCG GCGTGCCGGC GGAGCGCGTG ATCCGCATCG GCGACAACAA GGGCGCGCGC
TACGCCTCGG ACAACTTCTG GATGATGGGT GACACCGGCC CTTGCGGCCC GTGCACCGAG
ATCTTCTACG ACCACGGCGA CCACATCTGG GGCGGCCCTC CGGGATCGCC CGAGGAAGAT
GGCGACCGCT ACATCGAGAT CTGGAACAAC GTGTTCATGC AGTTCAACCG CGACGAGCAG
GGCGTGATGC ATCCGCTGCC CAAGCCCTCG GTGGACACCG GCATGGGCCT GGAGCGCATC
TCGGCGGTGC TGCAGCATGT GCACGCCAAC TACGAGATCG ACCTGTTCCA GGCGCTGATC
AAGGCGGCGG CGCGGGAAAC CTGCAGTGCC GACATGGACT CGCCCTCGCT GAAGGTGCTG
GCCGACCACA TCCGCGCCTG CTCCTTCCTG ATCGCCGACG GCGTGATCCC GGGCAACGAG
GGCCGCGGCT ATGTGCTGCG CCGCATCATC CGCCGCGCCA TCCGCCACGG CTACAAGCTC
GGCGCGCGCG CCGCCTTTTT CCACAAGATG GTGCCCGACC TGGTCGCCGA GATGGGCAGC
GCCTATCCCG AGCTGAAGGA CGGCGAGCGC CGCATCATGG ACGTGCTGCG CCAGGAAGAA
GAGCGCTTCT TCGCCACCAT CGAGAACGGC ATGGCGATCG TCGAGGCCGA GCTCGCCGCG
ATGGAAGCGG CGGGCAAGAA GGTCTTCGAC GGCGACACCG CCTTCAAGCT GCACGACACC
TTCGGTTTCC CGCTCGATCT CACAGCCGAC ATCTGCCGCG AACGCGAGGT CACCGTCGAC
GCGCTCGCCT TCGACGCCGC GATGGCGCGC CAGAAGGAGC AGGCGCGCGC CGCCGGCAAG
TTCAAGATGG CCGCCAACCT GGAATACGAC GGCCCCGAGA CCACCTTCCA CGGCTACACG
CTGCTGGAAG AGAAGGGCAA CATCCTCGCG CTGTACAAGG ACGGCGTCCC GGTCAATGAG
CTGCTCGAGG GCGAGATGGG TGTGGTCGTG CTCGACCACA CCCCGTTCTA TGCCGAGTCC
GGCGGCCAGG TCGGCGACCG CGGCGAGCTG CGCGCCGCCG CCGGCATCTT CGGCGTGGAA
GACACGCAGA AGATCCAGGC CGCGGTGTTC GGCCATCACG GCGTGGTGCG CACCGGCAAG
CTGGCGGTCG GGCAGGGCGT GGTCGCGCGG GTGGACGTCG CCGCGCGCGC CGCCACCGCG
CGCAACCACT CGGTCACCCA CCTGATGCAC AAGGCGCTGC GGGAAGTGCT TGGCGCCCAC
GTGCAGCAGA AGGGCTCGCT GGTCGATCCC GACAAGACCC GCTTCGACTT CGCCCACACC
GCGCCGATGA GCGCCGAGGA GATCCGCGAG GTCGAGGAGA TCGTCAACCG CGAGATCCTC
GCCAACGCCG CCACGCAGGC CGAGGTGATG GCGCTGGAGG CGGCGCAGAA GTCGGGCGCG
ATGATGCTGT TCGGCGAGAA GTACGCCGAC GAGGTGCGTG TGCTGTCGAT CGGCACGTCG
AAGGAGCTGT GCGGCGGCAC CCACGTGGCG CGCACCGGCG ACATCGGCCT GTTCAAGATC
GTCGGAGAGG GCGGTGTCGC CGCCGGCATC CGCCGCGTCG AGGCGATCAC CGGCGAGAAC
GCGCTGCGCT ACGCCCAGGA GCAGGAGCGC CGCGTGCAGG GCATGTCGGC GCTGCTCAAG
GTCCAGCCCG ACGAGGTCGC CGAGCGCGTC GCCGGCATCC TCGACAACGT TCGTGCGCTG
GAGAAGGAAC TGGCCCGCCT CAAGAGCAAG CTCGCGGCCA GCCAGGGCGA CGAGCTGGTG
AGTCAGGCGG TCGAGATCAA AGGCATCAGG GTGCTCGCCG CCCTGCTCGA AGGCGCCGAC
GCGCCGACCC TGCGCGACAC CATGGACAAG CTCAAGGACA AGCTCAAGTC GGCCGCGATC
GTGCTCGCCG CGGTCGCCGA CGGCAAGGTC AGCCTGATCG CGGGCGTCAC CGCCGACCAC
ACCGCCAAGG TCAAGGCTGG CGAGCTGGTC AACTTCGTCG CCCAGCAGGT CGGCGGCAAG
GGCGGCGGCC GCCCCGACAT GGCCCAGGCC GGCGGCACCC AGCCGGAGAA CCTGGCGGCG
GCGCTGGCGG GGGTGAAGGA CTGGGTGGCC GGGAAGCTGT AA
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| Protein sequence | MKSAEIRDAF LKFFESKGHQ IVASSSLVPH EDPTLLFTNA GMNQFKDVFL GFDKRPYTRA
TTSQKCVRAG GKHNDLENVG YTARHHTFFE MLGNFSFGDY FKRDAIAYAW ELLTEVFKLP
KDKLWVTVYA EDDEAYDIWT KEVGVPAERV IRIGDNKGAR YASDNFWMMG DTGPCGPCTE
IFYDHGDHIW GGPPGSPEED GDRYIEIWNN VFMQFNRDEQ GVMHPLPKPS VDTGMGLERI
SAVLQHVHAN YEIDLFQALI KAAARETCSA DMDSPSLKVL ADHIRACSFL IADGVIPGNE
GRGYVLRRII RRAIRHGYKL GARAAFFHKM VPDLVAEMGS AYPELKDGER RIMDVLRQEE
ERFFATIENG MAIVEAELAA MEAAGKKVFD GDTAFKLHDT FGFPLDLTAD ICREREVTVD
ALAFDAAMAR QKEQARAAGK FKMAANLEYD GPETTFHGYT LLEEKGNILA LYKDGVPVNE
LLEGEMGVVV LDHTPFYAES GGQVGDRGEL RAAAGIFGVE DTQKIQAAVF GHHGVVRTGK
LAVGQGVVAR VDVAARAATA RNHSVTHLMH KALREVLGAH VQQKGSLVDP DKTRFDFAHT
APMSAEEIRE VEEIVNREIL ANAATQAEVM ALEAAQKSGA MMLFGEKYAD EVRVLSIGTS
KELCGGTHVA RTGDIGLFKI VGEGGVAAGI RRVEAITGEN ALRYAQEQER RVQGMSALLK
VQPDEVAERV AGILDNVRAL EKELARLKSK LAASQGDELV SQAVEIKGIR VLAALLEGAD
APTLRDTMDK LKDKLKSAAI VLAAVADGKV SLIAGVTADH TAKVKAGELV NFVAQQVGGK
GGGRPDMAQA GGTQPENLAA ALAGVKDWVA GKL
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