Gene Tmz1t_1558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1558 
Symbol 
ID7083640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp1734880 
End bp1735986 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content66% 
IMG OID643698575 
ProductTRAP dicarboxylate transporter- DctP subunit 
Protein accessionYP_002355212 
Protein GI217969978 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.197764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAACGTC GTTCATTCCT CAAGAAGGCC AGCGTCGGCC TTGCCGCCGG TGCCGCCGCA 
GGCGTCGCCT CCACCGCGGC CGTCGCCGCC CCCGCCGTCC AGACCGGCCT GCCCGAGATC
AAGTGGCGCA TGACCTCGAG CTTCCCCAAG AGCATCGACA CCCTGTACGG CAGCGCCGAA
CTGCTCGCCA ACCGCCTGCG CGAGATCACC GGCGGCAAGT TCGACATCCG CATCTTCCCG
GCCGGCGAGA TCGTCCCCGG CCTGCAGGCG CTCGACGCGG TGCAGCAGGG CACGGTCGAG
ATGTGCCACT CGTGCTCCTA CTACTACGTC GGCAAGGACA AGACCTTCGC CTTCGGCACC
GCCGTGCCCT TCGGCATGAA CGCGCGCCAG ATGGACGCCT GGATCATCGG CGGCGGCGGC
CAGGAGCTGC TCGACGAGTT CTACGGCAAT TACAACGTGT ATTCCTTCCT CGGCGGCAAC
ACCGGCGTGC AGATGGGCGG CTGGTACCGC AAGCAGATCA ACACCCTGGA GGACATCAAG
GGCCTGAAGA TCCGCATCGC CGGCATCGCC GGCGAGATCA TGTCGCGCAT GGGCGCGATC
CCGCAGCAGA TCGCCGGCTC GGACATCTAC CCCTCGCTCG AGAAGGGCAC CATCGACGCC
GCCGAGTGGG TCGCCCCCTA CGACGACGAG AAGCTCGGCT TCTACAAGGT CGCGCCCCAC
TACTACTCGC CGGGCTGGTG GGAGCCGGGC CCGGTGGTGC ACTTCTATGT GAACAAGGCC
GAGTGGGACA AGCTGCCCAA GGAATACCAG GCCGCCTTCC GCGCCGCCTC GCGCGAGGCG
CACATCCAGA TGACCGCGAT GTACGACCAC AAGAACCCGC AGGCGCTCGC CCGCCTGCTC
GCGCAGGGCG TCAAGCTGCA GAACTTCTCC AACGAGATCA TGAAGAAGGC CTTCGACATC
TCGCGCGAGC TGTACGCCGA GGAGGCTGCG AAGAACCCGG CGTGGGCCAA GATCTACGCC
GAGTTCGAGA AGTACCGCAA GTCGCAGAAC GCGTGGTTCA GCGTCGCCGA GGCGGGCTTC
GACCGCTTCA TGCAGTCGGT GCGCTGA
 
Protein sequence
MERRSFLKKA SVGLAAGAAA GVASTAAVAA PAVQTGLPEI KWRMTSSFPK SIDTLYGSAE 
LLANRLREIT GGKFDIRIFP AGEIVPGLQA LDAVQQGTVE MCHSCSYYYV GKDKTFAFGT
AVPFGMNARQ MDAWIIGGGG QELLDEFYGN YNVYSFLGGN TGVQMGGWYR KQINTLEDIK
GLKIRIAGIA GEIMSRMGAI PQQIAGSDIY PSLEKGTIDA AEWVAPYDDE KLGFYKVAPH
YYSPGWWEPG PVVHFYVNKA EWDKLPKEYQ AAFRAASREA HIQMTAMYDH KNPQALARLL
AQGVKLQNFS NEIMKKAFDI SRELYAEEAA KNPAWAKIYA EFEKYRKSQN AWFSVAEAGF
DRFMQSVR