Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_1558 |
Symbol | |
ID | 7083640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 1734880 |
End bp | 1735986 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643698575 |
Product | TRAP dicarboxylate transporter- DctP subunit |
Protein accession | YP_002355212 |
Protein GI | 217969978 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.197764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAACGTC GTTCATTCCT CAAGAAGGCC AGCGTCGGCC TTGCCGCCGG TGCCGCCGCA GGCGTCGCCT CCACCGCGGC CGTCGCCGCC CCCGCCGTCC AGACCGGCCT GCCCGAGATC AAGTGGCGCA TGACCTCGAG CTTCCCCAAG AGCATCGACA CCCTGTACGG CAGCGCCGAA CTGCTCGCCA ACCGCCTGCG CGAGATCACC GGCGGCAAGT TCGACATCCG CATCTTCCCG GCCGGCGAGA TCGTCCCCGG CCTGCAGGCG CTCGACGCGG TGCAGCAGGG CACGGTCGAG ATGTGCCACT CGTGCTCCTA CTACTACGTC GGCAAGGACA AGACCTTCGC CTTCGGCACC GCCGTGCCCT TCGGCATGAA CGCGCGCCAG ATGGACGCCT GGATCATCGG CGGCGGCGGC CAGGAGCTGC TCGACGAGTT CTACGGCAAT TACAACGTGT ATTCCTTCCT CGGCGGCAAC ACCGGCGTGC AGATGGGCGG CTGGTACCGC AAGCAGATCA ACACCCTGGA GGACATCAAG GGCCTGAAGA TCCGCATCGC CGGCATCGCC GGCGAGATCA TGTCGCGCAT GGGCGCGATC CCGCAGCAGA TCGCCGGCTC GGACATCTAC CCCTCGCTCG AGAAGGGCAC CATCGACGCC GCCGAGTGGG TCGCCCCCTA CGACGACGAG AAGCTCGGCT TCTACAAGGT CGCGCCCCAC TACTACTCGC CGGGCTGGTG GGAGCCGGGC CCGGTGGTGC ACTTCTATGT GAACAAGGCC GAGTGGGACA AGCTGCCCAA GGAATACCAG GCCGCCTTCC GCGCCGCCTC GCGCGAGGCG CACATCCAGA TGACCGCGAT GTACGACCAC AAGAACCCGC AGGCGCTCGC CCGCCTGCTC GCGCAGGGCG TCAAGCTGCA GAACTTCTCC AACGAGATCA TGAAGAAGGC CTTCGACATC TCGCGCGAGC TGTACGCCGA GGAGGCTGCG AAGAACCCGG CGTGGGCCAA GATCTACGCC GAGTTCGAGA AGTACCGCAA GTCGCAGAAC GCGTGGTTCA GCGTCGCCGA GGCGGGCTTC GACCGCTTCA TGCAGTCGGT GCGCTGA
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Protein sequence | MERRSFLKKA SVGLAAGAAA GVASTAAVAA PAVQTGLPEI KWRMTSSFPK SIDTLYGSAE LLANRLREIT GGKFDIRIFP AGEIVPGLQA LDAVQQGTVE MCHSCSYYYV GKDKTFAFGT AVPFGMNARQ MDAWIIGGGG QELLDEFYGN YNVYSFLGGN TGVQMGGWYR KQINTLEDIK GLKIRIAGIA GEIMSRMGAI PQQIAGSDIY PSLEKGTIDA AEWVAPYDDE KLGFYKVAPH YYSPGWWEPG PVVHFYVNKA EWDKLPKEYQ AAFRAASREA HIQMTAMYDH KNPQALARLL AQGVKLQNFS NEIMKKAFDI SRELYAEEAA KNPAWAKIYA EFEKYRKSQN AWFSVAEAGF DRFMQSVR
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