Gene Tmz1t_1526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1526 
Symbol 
ID7083608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand- 
Start bp1704688 
End bp1705350 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content69% 
IMG OID643698543 
Productribose-5-phosphate isomerase A 
Protein accessionYP_002355180 
Protein GI217969946 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAGG ACGAACTCAA GAAAGCCGCC GCCTACGCCG CTCTCGACCA CGTGGTCGAA 
GGCAGCATCG TCGGCGTCGG CACCGGCTCC ACCGTCAACC ACTTCATCGA TGCGCTCGCC 
GGCATGCGCG ATCGCATCCG CGGCGCGGTC TCCAGCTCCG AAGCGAGCAC GCAACGCCTG 
CGCGCGCACG GCATCGAGGT GTTCGACCTC GACGGCATCG AGTCGCTGCC GGTGTATGTA 
GACGGCGCCG ACGAGATCGA CGGCGGCTTC GCGATGATCA AGGGCGGCGG CGGCGCACTG 
ACCCGCGAGA AGATCGTCGC CGCAGTGTCC GAGCGCTTCG TGTGCATCTG CGACGCGAGC 
AAGAAGGTCG AGGTGCTCGG CCGCTTCCCG CTGCCGATCG AGGTGATCCC GATGGCCCGC 
AGCCACGTCG CCCGCGAGCT GCGCGCGCTC GGCGGCGAGC CCAGGCTGCG CGAGGGCTTC 
GTCACCGACA ACGGCAACCT GATCCTCGAC GTGCATGGGC TGTCGATCAC CGACCCCGTC 
ACCATCGAGA TGCGGATCAA CCAGATCGTC GGTGTGGTCA CCAACGGGCT CTTCGCCGTG 
CGCGGCGCCG ACGTGCTGCT GCTCGCCGCC CCCGGCGGCG TGCAACGGCT GGACGCACGG 
TGA
 
Protein sequence
MTQDELKKAA AYAALDHVVE GSIVGVGTGS TVNHFIDALA GMRDRIRGAV SSSEASTQRL 
RAHGIEVFDL DGIESLPVYV DGADEIDGGF AMIKGGGGAL TREKIVAAVS ERFVCICDAS 
KKVEVLGRFP LPIEVIPMAR SHVARELRAL GGEPRLREGF VTDNGNLILD VHGLSITDPV 
TIEMRINQIV GVVTNGLFAV RGADVLLLAA PGGVQRLDAR