Gene Tmz1t_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1486 
Symbol 
ID7083568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand- 
Start bp1658420 
End bp1659082 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content74% 
IMG OID643698503 
Productintradiol ring-cleavage dioxygenase 
Protein accessionYP_002355140 
Protein GI217969906 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3485] Protocatechuate 3,4-dioxygenase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCACC ATTCCGGACT CCGCCGCCGC CTCGTCCTCG GCGGCAGCGC CACCCTGCTC 
TCCGCGCCGC TCGCCGCGGC GCAGCGCGTG CTGACGCCGA GCCAGATGCC CGGCCCCTTC 
TACCCGGTCA CCCCGCCGCT GCACAAGGAC AACGACCTCA CCCGGGTCGA AGGCCGCAGC 
GGTCGTGCCG CCGGGCAGAT CGCCGACCTG TCGGGCCGCG TGCTCGACCT CGACGGCCGC 
CCGCTGGCCG GCCTGCGCGT GGAGATCTGG CAATGCGACG CCAACGGCCG CTACCGCCAC 
CCGCGCGATC GCGCCGACGT GGAGGAGGAC CCGGACTTCC AGGGCTTCGG CCACACCCTC 
ACCGACGCCG ACGGGCGCTA CCGCTTCCGC ACCATCCGCC CGGTGCCCTA CCCAGGACGC 
ACGCCGCACA TCCACGCCGC GGTGTTCCAG GAAGGCGGGC GTCCCTTCGT CACCCAGATC 
TATGTCGCCG GCGAACCGCT CAACCAGCGC GACGGCCTCT TCATGCGCGT GCCCGAGGCG 
CTGCGCCCGC TGCTGCTGGC GGACTTCGTC GCGGCGGACG ATCCGGTCGC CACGCTGGCG 
GCGGAGTTCG ACTTCGTGCT GGCGCCGGCG CTGGCGGGAC TGTTCGAGGC GAGCACGGCC 
TGA
 
Protein sequence
MSHHSGLRRR LVLGGSATLL SAPLAAAQRV LTPSQMPGPF YPVTPPLHKD NDLTRVEGRS 
GRAAGQIADL SGRVLDLDGR PLAGLRVEIW QCDANGRYRH PRDRADVEED PDFQGFGHTL 
TDADGRYRFR TIRPVPYPGR TPHIHAAVFQ EGGRPFVTQI YVAGEPLNQR DGLFMRVPEA 
LRPLLLADFV AADDPVATLA AEFDFVLAPA LAGLFEASTA