Gene Tmz1t_1460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1460 
Symbol 
ID7083543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp1627511 
End bp1628275 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content69% 
IMG OID643698478 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_002355115 
Protein GI217969881 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.178949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCG CCACCTGGAA CGTCAACTCG CTCAAGGTCC GCCTGCCCCA GGTCCTCGAC 
TGGCTCGCCG CCAACCAGCC CGACGCGCTG TGCCTGCAGG AGCTCAAGCT CGAAGACAAG
GCCTTCCCGC TCGCCGAGCT CGAAGCCGCC GGCTACCACG CCGTCTTCAT CGGCCAGAAG
ACCTACAACG GCGTCGCCAT CCTCAGCCCG CAGCCGATCG ACGCGGCCAC GGTGGTGCGC
AACATCCCCG GCTTCGAGGA CGAGCAGAAG CGCATCATCG CCGCCACCAT CGCCGGTGTG
CGCGTGGTGT GCGGCTACTT CCCCAACGGC CAGGCGGTGG GTTCGGACAA GTTCGAGTAC
AAGCTGCGCT GGCTCGCCGC GCTGACCGAG TGGCTGCGCG CGGAGCTGAA GACGCACGAG
CGCCTGGTGC TGGCGGGCGA CTTCAACATC GCCCCCGAGG ACCGCGACGC CCACCCCGAC
TGGAAGGACG AGATCCACGT CTCCGCGCCC GAACGCGCCG CCTTCCGCGC GCTGCAGGAG
CTCGGCCTGA TCGACGCCTT CCGCCTCTTC GAGCAGCCCG AGCGCGCGTT CTCGTGGTGG
GACTACCGGA TGATGGCCTT CCGGCGCAAC TTCGGCCTGC GCATCGACCA CCTGCTGGTG
TCTCCGGCGT TGCGCGCGGC CTGCCGCAAC TGCGTGGTCG ACAAGGAACC GCGCCGGCTG
GAGCGTCCGT CGGACCACGC GCCGGTGGTG CTGGAACTGG CCTGA
 
Protein sequence
MKIATWNVNS LKVRLPQVLD WLAANQPDAL CLQELKLEDK AFPLAELEAA GYHAVFIGQK 
TYNGVAILSP QPIDAATVVR NIPGFEDEQK RIIAATIAGV RVVCGYFPNG QAVGSDKFEY
KLRWLAALTE WLRAELKTHE RLVLAGDFNI APEDRDAHPD WKDEIHVSAP ERAAFRALQE
LGLIDAFRLF EQPERAFSWW DYRMMAFRRN FGLRIDHLLV SPALRAACRN CVVDKEPRRL
ERPSDHAPVV LELA