Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_1460 |
Symbol | |
ID | 7083543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 1627511 |
End bp | 1628275 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643698478 |
Product | exodeoxyribonuclease III Xth |
Protein accession | YP_002355115 |
Protein GI | 217969881 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.178949 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGATCG CCACCTGGAA CGTCAACTCG CTCAAGGTCC GCCTGCCCCA GGTCCTCGAC TGGCTCGCCG CCAACCAGCC CGACGCGCTG TGCCTGCAGG AGCTCAAGCT CGAAGACAAG GCCTTCCCGC TCGCCGAGCT CGAAGCCGCC GGCTACCACG CCGTCTTCAT CGGCCAGAAG ACCTACAACG GCGTCGCCAT CCTCAGCCCG CAGCCGATCG ACGCGGCCAC GGTGGTGCGC AACATCCCCG GCTTCGAGGA CGAGCAGAAG CGCATCATCG CCGCCACCAT CGCCGGTGTG CGCGTGGTGT GCGGCTACTT CCCCAACGGC CAGGCGGTGG GTTCGGACAA GTTCGAGTAC AAGCTGCGCT GGCTCGCCGC GCTGACCGAG TGGCTGCGCG CGGAGCTGAA GACGCACGAG CGCCTGGTGC TGGCGGGCGA CTTCAACATC GCCCCCGAGG ACCGCGACGC CCACCCCGAC TGGAAGGACG AGATCCACGT CTCCGCGCCC GAACGCGCCG CCTTCCGCGC GCTGCAGGAG CTCGGCCTGA TCGACGCCTT CCGCCTCTTC GAGCAGCCCG AGCGCGCGTT CTCGTGGTGG GACTACCGGA TGATGGCCTT CCGGCGCAAC TTCGGCCTGC GCATCGACCA CCTGCTGGTG TCTCCGGCGT TGCGCGCGGC CTGCCGCAAC TGCGTGGTCG ACAAGGAACC GCGCCGGCTG GAGCGTCCGT CGGACCACGC GCCGGTGGTG CTGGAACTGG CCTGA
|
Protein sequence | MKIATWNVNS LKVRLPQVLD WLAANQPDAL CLQELKLEDK AFPLAELEAA GYHAVFIGQK TYNGVAILSP QPIDAATVVR NIPGFEDEQK RIIAATIAGV RVVCGYFPNG QAVGSDKFEY KLRWLAALTE WLRAELKTHE RLVLAGDFNI APEDRDAHPD WKDEIHVSAP ERAAFRALQE LGLIDAFRLF EQPERAFSWW DYRMMAFRRN FGLRIDHLLV SPALRAACRN CVVDKEPRRL ERPSDHAPVV LELA
|
| |