Gene Tmz1t_1424 details

Gene Information

• Locus tag: Tmz1t_1424
• Symbol: prfA
• ID: 7083507
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: +
• Start bp: 1587852
• End bp: 1588934
• Gene Length: 1083 bp
• Protein Length: 360 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 643698442
• Product: peptide chain release factor 1
• Protein accession: YP_002355079
• Protein GI: 217969845
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0216] Protein chain release factor A
• TIGRFAM ID: [TIGR00019] peptide chain release factor 1

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.997988
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCAGA GCATCCGCGA CAAACTCGAA CACCTCGCAA ACCGGCTCGA AGAGCTCGAC 
CGCACGCTCG CCTCCGAGGA GGGCGCGCGC GACATGAACG CCTTCCGCGA GCTCTCGCGC 
GAGCGCGCCG AGATCGAGCC GGTGGTGGCG CTGTACCGCG AGCATCGCCT GGCCGAGGCC 
GACTGCGCGA CCGCGCGCGA GCTGCTCGCC GACCCCGAGA TGCGTGAGCT CGGCGAACTC 
GAGCTTGCCG AGGGCGAGGC GCGCATCGAA GCGCTGGAGG CCGAGCTGCA GCGCGCGCTG 
CTGCCGCGCG ATCCCAACGA CGCGCGCAAC CTGTTCCTCG AGATCCGCGC CGGCACCGGC 
GGCGACGAGG CGGCGCTGTT CGCCGGCGAC CTCCTGCGCA TGTACACCCG CTACGCCGAA 
CGCCAGCGCT GGAAGGTGGA GATCGTGTCG GCGAGCGAAT CCGACCTCGG CGGCTACAAG 
GAGGTCATCG CCCGCGTGGT CGGCAACGGC GCCTATTCGA AGCTCAAGTT CGAATCCGGC 
GGCCACCGCG TGCAGCGTGT CCCGGTGACC GAGACCCAAG GGCGCATCCA CACCTCCGCC 
TGCACGGTCG CCGTGCTGCC CGAGGCCGAC GAGGTCGAGG CGGTGGACAT CAACCCCGCC 
GACCTGCGCA TCGACACCTT CCGCGCCTCG GGCGCGGGCG GGCAGCACAT CAACAAGACG 
GACTCCGCGG TGCGCATCAC GCACATTCCC ACCGGCATCG TCGTCGAGTG CCAGGACGAT 
CGCTCGCAGC ACCGCAACAA GGCGCAGGCC ATGGCGGTGC TCGCCGCGCG CCTGTACGAC 
GCCAGGGTGC GCGCGCAACA GAGCGCCGAG GCCGCGCAGC GCAAGAGCCT GGTCGGCAGC 
GGCGACCGCT CCGAGCGCAT CCGCACCTAC AACTTCCCGC AGGGGCGGGT GACCGACCAC 
CGCATCAACC TCACCCTCTA CAAGCTCGAT GCGGTGATGC AGGGCGAGCT CGACGAGATC 
GTCGACGCGC TCACCCTCGA GCACCAGGCC GACCTGCTCG CGGCACTCGG GGAGGATGCA 
TGA 

 

Protein sequence

MKQSIRDKLE HLANRLEELD RTLASEEGAR DMNAFRELSR ERAEIEPVVA LYREHRLAEA 
DCATARELLA DPEMRELGEL ELAEGEARIE ALEAELQRAL LPRDPNDARN LFLEIRAGTG 
GDEAALFAGD LLRMYTRYAE RQRWKVEIVS ASESDLGGYK EVIARVVGNG AYSKLKFESG 
GHRVQRVPVT ETQGRIHTSA CTVAVLPEAD EVEAVDINPA DLRIDTFRAS GAGGQHINKT 
DSAVRITHIP TGIVVECQDD RSQHRNKAQA MAVLAARLYD ARVRAQQSAE AAQRKSLVGS 
GDRSERIRTY NFPQGRVTDH RINLTLYKLD AVMQGELDEI VDALTLEHQA DLLAALGEDA