| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1384 |
|---|
| Symbol | |
|---|
| ID | 7084505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 1539882 |
|---|
| End bp | 1541273 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643698401 |
|---|
| Product | putative signal transduction protein |
|---|
| Protein accession | YP_002355039 |
|---|
| Protein GI | 217969805 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCGCG CCCTGCTCGG CCGGCTCTTC GGCCGCAAGC GCCCCGCCCC CTCCGTCGCA
GCGGGCGAGG CGGAGGGTTT CCGCCGCCTC CAGCGCGCGG CGCCGCTGCG CGCCGAGGGG
GCCCCCGCGA GCCCCGTCGA GGCCGGCGCC ACCTTCCTGT GCCGCGAAGC GGTGCTCGGG
CGCAACCAGC GCATCACCGG CTACCAGTTC ATGCTGCAGG CGGGCACGCG CGCGCACATC
CGCCACAGCA GCCGCAACAT CCACCACGTC TTCGCCGAAG TGCTGGTGCG CAGCCTGGTC
GACGCGGACA TCGGCGAGCT GCTCGGCGAA CGCCTGGCCT TCATCGACCT GCCCGATTCC
TTCCTGTCCC ACCCCAGCCT CGCCGCCCTC CCGGCGCGCA ACATGGTGAT CGTGCCGACC
GTGCTCCCCG ATGCCGGCGC TCCCGAGCCC GCCGCGCTGC GCGCCGCCGT GACCGCGCTG
CGCGCGCGCG GCATGCGCAT CGGCCTGATC GATCCGACCG TGGTCGGCGA GCTCGCCCAC
CTGCTGCCGC AGGCCGAGTT CATCGTCGCC CAGGCCGAGG GCCTCGACGC CCGCCGCGGC
CTCAAGCTCG GCAACATCGC CCTCGAGGTG GCGCACGACG CGCGCCTGGT GGTGCGCGGC
CTGCCCTCGC TCGACGACTT CCGCTTCTGC TGCAAGCTCG GCGCCAGCCT CTTCCAGGGC
CCCTTCATCA CCAGCCGCGA GGACTGGAGC GCGCGCGACC CCGGCCCCAA CACCGCACGC
ATCGGCGCCC TGATCGCCCG CCTGCGCGCA GATGCCGACA CCCGCGAGCT CGCCGACCTG
CTCAAGCAGG ACGCCGCGTT GTCGCTGCGC CTGCTGCGCT ACATCAACTC CGCGGCGAAC
GCGCTGCCGC AGCCGGTGTC CTCGATCGAA CATGCGCTCG CGCTGCTCGG CCGCGAGCGC
CTGCAGCGCT GGCTGATCCT GCTCGCGTGC ACCGCGGACA AGGCGGGAGA ACGCGGCGGC
GCGGTGCTGG AGACCGCGCT GGTACGCGGG CGCATGATGG AGCTGCTGGG TGCCGGCCGC
CCTGCGGCCG AGTCCGACGC GCTCTTCCTG GTCGGCCTGC TGTCGCTGAT CGACGTGATC
CTGCAGGTGC CGCTCGACAA GGCGCTCGCC CCGCTCGCGC TGGGAGCGGA GGTCGAAGCC
TCGGTACGTG GCGACCATGG CCCCTACCAG GCCCTGCTCG CGCTCACGGT GGCGTGCGAG
CGTGGAGAGG CCGGAGAGGG TGCGGCGGGC GACGCGCTCC GCGCCGCCGC CGCGGCCTGC
GGCATCGCCC CCGAGCAGGC CTCCGAATGC CACCTGCAGG CCCTGTCCTG GGCGATGCAG
ATCCAGGACT GA
|
|---|
| Protein sequence | MLRALLGRLF GRKRPAPSVA AGEAEGFRRL QRAAPLRAEG APASPVEAGA TFLCREAVLG
RNQRITGYQF MLQAGTRAHI RHSSRNIHHV FAEVLVRSLV DADIGELLGE RLAFIDLPDS
FLSHPSLAAL PARNMVIVPT VLPDAGAPEP AALRAAVTAL RARGMRIGLI DPTVVGELAH
LLPQAEFIVA QAEGLDARRG LKLGNIALEV AHDARLVVRG LPSLDDFRFC CKLGASLFQG
PFITSREDWS ARDPGPNTAR IGALIARLRA DADTRELADL LKQDAALSLR LLRYINSAAN
ALPQPVSSIE HALALLGRER LQRWLILLAC TADKAGERGG AVLETALVRG RMMELLGAGR
PAAESDALFL VGLLSLIDVI LQVPLDKALA PLALGAEVEA SVRGDHGPYQ ALLALTVACE
RGEAGEGAAG DALRAAAAAC GIAPEQASEC HLQALSWAMQ IQD
|
|---|
| |