| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1245 |
|---|
| Symbol | |
|---|
| ID | 7085409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 1378919 |
|---|
| End bp | 1379689 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643698261 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_002354900 |
|---|
| Protein GI | 217969666 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0649443 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACGT CCGACCACAT CCTCATCGTC GACGACGACC GTGACATCCG CCAGCTGCTT
GCCGACTACC TCGAGAAGCA GGGACTGCGC TGCACCACCG CGGCCGACGG GCGCGAGATG
AAGGCAGCGC TCGAGACCCA CCGCATCGAC CTCATCGTGC TCGACCTGAT GATGCCCGGC
GAGGATGGAC TCACCCTGTG CCGCAACCTG CGCGCGAGCG GCGGGCCGCA CGCCAACACC
CCGATCCTGA TGCTCACCGC GCGCGGCGAG GACATGGACC GCATCATCGG CCTCGAGATG
GGTGCCGACG ACTACCTCGC CAAGCCCTTC GTGCCGCGCG AGCTCTTCGC CCGCATCCGC
GCGGTGCTGC GCCGCACCCG CGCGTTGCCG CCCAACCTCG ACGCCGCCCC GCCCGCCAAC
GCGCGCCTGC TGCGCTTCGC GCACTGGCGC CTGGACACGA TCAACCGCCA CCTGGTCGAC
GCCGAGGGCA CGGTGGTCGC GCTCTCCGGC GCCGAGTACC GCATGCTCGC GGTCTTCCTG
TCGCACCCGC AGAAGGTGCT GTCGCGCGAC CAGCTCATGG AACTCACCCA GGGACGCGAG
GCCGACGTGT TCGATCGCTC GATCGACCTG CTGGTGAGCC GGCTGCGCCA GCGCCTCGGC
GACAACGCGC GCGAACCGGC GATCATCAAG ACCGTGCGCA ACGAGGGCTA CGTGCTCGCC
GCCGAGGTCG TCGCCGAGAC CGCGGACACC GACGGGAGCG GCGCGCGATG A
|
|---|
| Protein sequence | MNTSDHILIV DDDRDIRQLL ADYLEKQGLR CTTAADGREM KAALETHRID LIVLDLMMPG
EDGLTLCRNL RASGGPHANT PILMLTARGE DMDRIIGLEM GADDYLAKPF VPRELFARIR
AVLRRTRALP PNLDAAPPAN ARLLRFAHWR LDTINRHLVD AEGTVVALSG AEYRMLAVFL
SHPQKVLSRD QLMELTQGRE ADVFDRSIDL LVSRLRQRLG DNAREPAIIK TVRNEGYVLA
AEVVAETADT DGSGAR
|
|---|
| |