| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1242 |
|---|
| Symbol | |
|---|
| ID | 7085406 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 1374576 |
|---|
| End bp | 1376069 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643698258 |
|---|
| Product | glycerol kinase |
|---|
| Protein accession | YP_002354897 |
|---|
| Protein GI | 217969663 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0554] Glycerol kinase |
|---|
| TIGRFAM ID | [TIGR01311] glycerol kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0753074 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTACC TGCTCGCCCT CGACCAGGGC ACCACCAGCT CGCGCGCGAT CGTGTTCGAC
GCCGATGGCC GCGTGCGCGG CCTCGCCCAG CAGGCATTCG CGCAGCACTT CCCTGCGCCC
GACCGGGTCG AGCACGATCC CCAGGACATC CTGCGTACCC AGCTCGACTG CGCCCGCGAG
GCGCTCGCCA ATGCCGGCGT GGCCGCACGC GAGGTGGCGG CGATCGGCAT CGCCAACCAG
CGCGAGACCA CCGTGCTGTG GGAGCGCGCC AGTGGACGCG CCCTCGCCCC CGCGATCGTC
TGGCAGGACC GCCGCACCGC GGTAGAGTGC GAGCGCCTGC GCGCCGCGGG CTGCGCAGAG
GACGTGCGCG CGCGCACCGG GCTGGAGCTC GATCCCTATT TCTCCGCCAC CAAGCTCGCC
TGGCTGCTCG ACCACGTTCC CGATGCGCGC GTGCGCGCCG AGCGCGGCGA GCTCGCCTTC
GGCACCATCG ACAGCTGGCT GCTGTGGCAT CTGAGCGGCG GCCGGCTGCA CCTGACCGAT
GCGGGCAACG CCGCGCGCAC GCTGCTCTTC AACCTCCACA CGCTGGACTG GGATCCGGTG
TTGCTCAAGC GCTTCCGCAT CCCGCCCGTG CTGCTGCCGC GCGTGGTGGC GAGCAGCGGG
GTGTGCGGCG AGACCGATCC GGCGCTGTTC GGTGCCGCGA TCCCGATCGC CGGCATCGGC
GGCGACCAGC AGGCGGCGAC CTTCGGCCAG GCCTGCCTCG CCCCGGGCAT GGCGAAGAAC
ACCTACGGCA CCGGCTGCTT CCTGCTCATG AACACCGGCC ATGTGCCGGT GGCGTCCGCG
CACCGGCTAT TGACCACCGT GGGGTGGACC GGGGTGGATG CGGCGCCCAG CTACGCGCTC
GAGGGCAGCG TGTTCATGGG CGGTGCGGTG GTGCAGTGGT TGCGTGACGG CCTCGGGCTG
GTGAAGCGCG CGTCCGAGGT CGAGGCCTTG GCGGCGAGCG TGCCCGACAG CGGTGGGGTG
GTGCTGGTGC CGGCCTTCAC CGGGCTGGGC GCGCCGTACT GGGACCCGCA CGCGCGCGGC
ACCCTGCTCG GCCTGTCGCG TGGCAGCGGT GCGGCGCACA TCGCGCGTGC GGCACTGGAG
GCGATCGCCA TGCAGAGCGC CGACCTCGTC CAGGCGATGG CACGCGACGG CGCCGCGCCG
CTCGCCGAGC TGCGCGTCGA TGGCGGCGCC GCGGCCAACG ACCTGCTGAT GCAGATGCAG
GCCGACCTGC TCGGCGTGCC GGTGCTGCGT CCGCGCCTGC TCGAGACCAC CGCCTTCGGC
GCCGCCTGCC TGGCTGCGCT TGGCTGCGGG CTGTGGAAGC GGCCGCAGGA GATCGCCACG
CACTGGCAAC TCGACCGCCG CTTCGAGCCG CGCTGGCCGG CGGCACGGCG CGACGAGGCA
CGCGCCGTGT GGGTGCGCGC GGTCGAGCGT GCGCGGGCGT GGGCGCAGGA CTGA
|
|---|
| Protein sequence | MAYLLALDQG TTSSRAIVFD ADGRVRGLAQ QAFAQHFPAP DRVEHDPQDI LRTQLDCARE
ALANAGVAAR EVAAIGIANQ RETTVLWERA SGRALAPAIV WQDRRTAVEC ERLRAAGCAE
DVRARTGLEL DPYFSATKLA WLLDHVPDAR VRAERGELAF GTIDSWLLWH LSGGRLHLTD
AGNAARTLLF NLHTLDWDPV LLKRFRIPPV LLPRVVASSG VCGETDPALF GAAIPIAGIG
GDQQAATFGQ ACLAPGMAKN TYGTGCFLLM NTGHVPVASA HRLLTTVGWT GVDAAPSYAL
EGSVFMGGAV VQWLRDGLGL VKRASEVEAL AASVPDSGGV VLVPAFTGLG APYWDPHARG
TLLGLSRGSG AAHIARAALE AIAMQSADLV QAMARDGAAP LAELRVDGGA AANDLLMQMQ
ADLLGVPVLR PRLLETTAFG AACLAALGCG LWKRPQEIAT HWQLDRRFEP RWPAARRDEA
RAVWVRAVER ARAWAQD
|
|---|
| |