Gene Tmz1t_1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1238 
Symbol 
ID7083898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp1371431 
End bp1372237 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content71% 
IMG OID643698254 
Productglutamate racemase 
Protein accessionYP_002354893 
Protein GI217969659 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGG CTGCGCGCCC GATCGGGGTG TTCGATTCCG GCGTCGGCGG GCTCACCGTG 
GTGCGCGCGC TCATGGAGCG CCTGCCGCTC GAGGACATCG TCTACTTCGG CGACACCGCG
CGCGTGCCCT ACGGGGTGAA GTCGGTCGCC ACGATCGAGC ACTTCACCGC GCAGATCACC
GAATTCCTGC TGCAGCGCGA CGTCAAGATG CTGATCATCG CGTGCAACAC CATGGCGGCG
GTGGCGGCGG ACGTGGTGCA CCGGCTGGCC GCCGGCATCC CGGTGCTCGA CGTCATCGAG
GCCGGCGCGC GCGCCGCGGT GGCGGCCTCG CCGGGACGGC GCATCGGTGT CATTGGCACG
CCGACCACGA TCAACAGCAA CGCCTACGCG CGCCGCATGC ACGAACTCGA TCCGGCGGTG
CGGGTGTATT CCCAGGCCTG CCCGCTGTTC GTGCCGCTGG TCGAGGAAGG CTGGCTGGAC
CACGAGGTGA CCCGCCTCAC CGCGCAGGAA TACCTGCGCC CGGTGCTCGC CGAGGAGGTC
GACAGCCTCG TGCTGGGCTG CACCCATTAC CCGCTGCTCA AGCCCCTGCT ACGCGACGTC
GCCGGGGCGC GCGTGCGCCT GATCGACTCG GCGCTGACCA CCGCGGAGTT GGCCGCCGAG
CGCCTGCAGC TGTCCGGGCT GGCGCGCGGT GGCGGGGGCG TCGCAGATTA CCGCTTCGTG
GTGAGCGACG TGCCGCTGCG CTTCCAGACC ATCGGCGAGC GCTTTCTGGG GCGTTCGCTC
GGTGCGGTGG AGAAGGTCGA TTGGTAG
 
Protein sequence
MSAAARPIGV FDSGVGGLTV VRALMERLPL EDIVYFGDTA RVPYGVKSVA TIEHFTAQIT 
EFLLQRDVKM LIIACNTMAA VAADVVHRLA AGIPVLDVIE AGARAAVAAS PGRRIGVIGT
PTTINSNAYA RRMHELDPAV RVYSQACPLF VPLVEEGWLD HEVTRLTAQE YLRPVLAEEV
DSLVLGCTHY PLLKPLLRDV AGARVRLIDS ALTTAELAAE RLQLSGLARG GGGVADYRFV
VSDVPLRFQT IGERFLGRSL GAVEKVDW