Gene Tmz1t_1209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1209 
Symbol 
ID7083869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand- 
Start bp1338856 
End bp1339776 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content66% 
IMG OID643698225 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_002354864 
Protein GI217969630 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATGG CTGACCGCGA CGGCTTCATC TGGCAGGACG GCAAGCTCGT TCCGTGGCGC 
GAGGCGACCA CCCACGTCCT CACCCACTCG CTCCACTACG GCCTCGCCGT GTTCGAGGGC 
GTCCGTGCCT ACAACACCGT CAGCGGCACC GCGATCTTCC GCCTCGCCGA GCACACCCAG 
CGCCTGATCA ATTCCGGCAA GATCTACATG ATGGACATCC CCTATTCCAA GGATGAACTC 
ATGGAGGCGC AGAAGGAGGT CGTGCGCGCG AACAAGCTCG AGTCCTGCTA CCTGCGCCCG 
ATCGCCTTCT ACGGCTCGGA AAAAATGGGC ATCTCCACGC TCGGCGCGCG CGTCCATGTC 
GCGATCGCGG CCTGGCCCTG GGGCGCCTAC CTCGGCGAGG AAGGCCTGCA GAAGGGCATC 
CGCGTGAAGA CCTCGTCCTA CACCCGCCAC CACGTCAACT CGACGATGCC GCGCGCCAAG 
CTGTCGGCGA CCTACCCGAA CTCGATCCTC GCCAACCTCG AGGTCACCCG CATGGGCTAC 
GACGAGGCCC TGCTGCTCGA CAACCAGGGC TTCGTCGCCG AGGGTGCAGG CGAGAACCTC 
TTCATCGTCA AGGACGGCCG CATCTACGAG CCCGAGATCG CCTCCGCGCT CACCGGCATC 
ACCCGCGACT CCATCCACGT GATCGCGCGC GAGCTCGGCT ACGAGGTCGG CACCAAGCGC 
CTGACCCGCG ACGACATCTA CCTCGCCGAC GAGGCCTTCT TCACCGGCAC CGCCGCCGAG 
GTCACCCCGA TCCGCGAGCT CGACGACCGC CAGATCGGCG AAGGCAGGCG CGGCCCGGTC 
ACCGAGAAGA TCCAGACCCG CTTCTTCGAC GTCGTCAACG GCCGTGCGCC CGAATACGCG 
CACTGGCTCG CCCACGTCTG A
 
Protein sequence
MSMADRDGFI WQDGKLVPWR EATTHVLTHS LHYGLAVFEG VRAYNTVSGT AIFRLAEHTQ 
RLINSGKIYM MDIPYSKDEL MEAQKEVVRA NKLESCYLRP IAFYGSEKMG ISTLGARVHV 
AIAAWPWGAY LGEEGLQKGI RVKTSSYTRH HVNSTMPRAK LSATYPNSIL ANLEVTRMGY 
DEALLLDNQG FVAEGAGENL FIVKDGRIYE PEIASALTGI TRDSIHVIAR ELGYEVGTKR 
LTRDDIYLAD EAFFTGTAAE VTPIRELDDR QIGEGRRGPV TEKIQTRFFD VVNGRAPEYA 
HWLAHV