Gene Tmz1t_1190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1190 
Symbol 
ID7083850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp1319221 
End bp1321116 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content71% 
IMG OID643698206 
ProductDNA primase 
Protein accessionYP_002354845 
Protein GI217969611 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID[TIGR01391] DNA primase, catalytic core 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCCCC AGTCCTTCGT CCAGGAACTG CTTTCCCGCG TCGACATCGT CGACGTCATC 
GAACGCTACC TCCCGCTCAA GAAGAGCGGC GCCAACTACT TCGCCTGCTG CCCCTTCCAC
GGCGAGAAAT CCGCCTCGTT CTCGGTCAGC CCGTCCAAGC AGTTCTACCA CTGCTTCGGT
TGCGGCGTGC ACGGTAGCGC GGTCGGCTTC CTGATGGAGT ACAGCGGGCT GGGCTTCGTC
GACGCGATCA AGGAGCTCGC TGCCCAGGTC GGCCTGCAGG TGCCCGACGA TGGCCGCAGC
GCGGCACCCG TGCATGACGA CCCGAGCGAA CGCCTTTATG AGGCGATGGC GGTGGCGGCG
CGCTTCTACC GCGACCAGCT CAAGCCTTCC CGCCAGGCCA TCGACTACCT CAAGCGCCGC
GGGCTGTCGG GCGAGGTCGC CGCGCGCTTC GGGCTCGGCT ACGCGCCCGA CGAGTGGCAG
GCGCTGGAGA AGGCCTTCCC CGACTACCAG GCGAAGACGC TCGCCGACGC CGGCCTGGTC
ATCGACAACG AGCAGGGGCG GCGCTACGAC CGCTTCCGCA ACCGCATCAT CTTCCCGATC
CACGACCGCC GCGGACGCAT CATCGCCTTC GGCGGGCGCG TGCTCGACAA GGGCGAACCC
AAGTACCTGA ACTCGCCCGA GACCCCGCTG TTCGAGAAGG GGCGCGAGCT CTACGGCCTC
TTCCTGGCGC AGAAGGCGAT CCGCGACGCC GGCTTCGCGG TCGTGGTCGA GGGCTACATG
GACGTGGTCG CGCTCGCCCA GTTCGCCATC GAGAATGCGG TCGCCACGCT CGGCACCGCG
ACCACGCCGC AGCATATCCA CACCCTGCTG CGCCAGACCG ACCGCATCGT GTTCTGCTTC
GACGGCGACG CCGCAGGCCG CCGCGCGGCA TGGCGTGCGC TCGAGAACGC ACTCGAATCC
CTGCGCGACG ACGCCACCCT GGCCTTCCTG TTCCTGCCCG CCGAGCACGA CCCGGACTCC
TTCGTGCGCG CCGAGGGCAC CGAAGCCTTC CGCAAGGCCG CGCTCGCCGC CACCCCGCTG
GGGAGCTTCC TGATCCAGGA GCTGTCCGGC CGCCATCCGC TCGACAGCGC CGAGGGCCGC
GCGGCCTTCG TGCATGAGGC GGCGCCGCTG GTCACTCGCA TCGCCGCGCC GCTGCTGAAG
CTGCAGGTGG TGAAGGCGGT GGCCGAGAGC GCGGGCATGA CCCAGGGCGA GGTCGAATAC
GCCTTCGAGC AGCTCGCCGC CAGCGCCCCG CGCCGGCGTG GCGCCTCGGC GCCCACCCCG
CCCCGCGCCC CCGCCGCGAG CATCGCAAGC ACCGAGGCGG ACGCCCCCTT CTTCGACGAT
GCCCCCCCGC CCGCCCGCAG CGCGCCGCCG CGCGGCCAGG CGCCGCGCCC GCGCGCGGGC
GGCCGGCGCA AGCCCCCCTC CACCGCCGGC ACCCTGCTGC GCCTGGTGAT GCAGCACCCG
ACCTGGGCCG CGCGCATGCC GGTCGGCCTG GTGCCCGACG ACAGCCCGGA AGGCCTCGCG
CTGATCGCGA TCATCGACCT CTGCAGCCTC GGCGAGCCGA TCCCCTCGGG CGGACTGGGC
GCGCTGATCG AGCGCTTCCG CGAGACACCC CACGCCGAAA CCCTCTCACG TGTCGCCGCG
GAACTCGTGG AGGCGGAATT CGACGAAGCG GTGGTCGAGA CGCTGTTCGA GGACGCCCTG
CGCAAACTGC AGATCGACGG CGTCGGCAAG GAGATCACCG CCCTGCTACA ACGGGATCGT
GAGCAAGGCC TGGACGCCGC CGGCCGCCAT CGCCTCGGAG AGCTGCTGCT CGAGAAGCGG
AACCTCGCGA GCAGCGGCAA AGTCTCAGAT TTATAG
 
Protein sequence
MIPQSFVQEL LSRVDIVDVI ERYLPLKKSG ANYFACCPFH GEKSASFSVS PSKQFYHCFG 
CGVHGSAVGF LMEYSGLGFV DAIKELAAQV GLQVPDDGRS AAPVHDDPSE RLYEAMAVAA
RFYRDQLKPS RQAIDYLKRR GLSGEVAARF GLGYAPDEWQ ALEKAFPDYQ AKTLADAGLV
IDNEQGRRYD RFRNRIIFPI HDRRGRIIAF GGRVLDKGEP KYLNSPETPL FEKGRELYGL
FLAQKAIRDA GFAVVVEGYM DVVALAQFAI ENAVATLGTA TTPQHIHTLL RQTDRIVFCF
DGDAAGRRAA WRALENALES LRDDATLAFL FLPAEHDPDS FVRAEGTEAF RKAALAATPL
GSFLIQELSG RHPLDSAEGR AAFVHEAAPL VTRIAAPLLK LQVVKAVAES AGMTQGEVEY
AFEQLAASAP RRRGASAPTP PRAPAASIAS TEADAPFFDD APPPARSAPP RGQAPRPRAG
GRRKPPSTAG TLLRLVMQHP TWAARMPVGL VPDDSPEGLA LIAIIDLCSL GEPIPSGGLG
ALIERFRETP HAETLSRVAA ELVEAEFDEA VVETLFEDAL RKLQIDGVGK EITALLQRDR
EQGLDAAGRH RLGELLLEKR NLASSGKVSD L