Gene Tmz1t_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1170 
SymbolaspS 
ID7083829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp1296132 
End bp1297931 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content67% 
IMG OID643698185 
Productaspartyl-tRNA synthetase 
Protein accessionYP_002354825 
Protein GI217969591 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0173] Aspartyl-tRNA synthetase 
TIGRFAM ID[TIGR00459] aspartyl-tRNA synthetase, bacterial type 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAACTC ACTACTGCGG CAAAGTCACC GCCGCCGACC TCGACCAGAT CGTCACCATT 
TGCGGCTGGG TACATCGCCG CCGCGACCAC GGCGGCGTCA TCTTCATCGA CCTGCGCGAT
CGCGAGGGCC TGGTGCAGGT GGTGTGCGAC CCCGACCGCG CGGAGATGTT CAAGACGGCC
GAATCGGTGC GCAACGAGTT CGTCCTCAAG CTGAGCGGCA AGGTGCGCCG CCGTCCCGCC
GGCACCGAGA ACGCCAACCT CGTCTCGGGC GAGATCGAGA TCCTCTGCCA CGACATCGAG
GTGCTCAACG CCGCCGCCAC GCCGCCCTTC CAGCTCGACG ACGAGAACCT GTCCGAGACG
GTGCGCCTGA CCAACCGCGT CATCGACCTG CGTCGCCCGC AGATGCAGAA GAACCTGATG
CTGCGCTACA AGACCACGAT GGCCTTCCGC CGCTTCCTCG ACGGCGCCGG CTTCATCGAC
GTCGAGACGC CGATGCTGAC CAAGAGCACG CCCGAAGGCG CGCGCGACTA CCTGGTGCCC
TCGCGCGTGC ACCCGGGCCA GTTCTTCGCC TTGCCGCAGT CGCCCCAGCT CTTCAAGCAG
CTGCTGATGG TGGCCGGCTA CGACCGCTAC TACCAGATCG TCAAGTGCTT CCGCGACGAG
GACCTGCGCG CCGACCGCCA GCCCGAATTC ACCCAGGTCG ACCTCGAGAC CTCGTTCATG
AACGAGCACG AGATCACCGC CCTGGTCGAG GAGATGATCC GCTACGTGTT CAAGGAAGCG
ATGGCGGTCG AGCTGCCCGC GCCCTTCCCG CGCATGACCT ACGCCGAGGC GATGCGCCGC
TACGGCTCGG ACAAGCCCGA CCTGCGCGTG ACGCTGGAAC TCACCGACGT CACCGACGCG
GTGCAGGACG TCGCCTTCAA GGTCTTCAGC GGCCCCGCCA CCTCGGGCGG CCGCGTCGCC
GCGATGCGCG TGCCGGGCGG CAACAGCCTG ACCCGCGGCG AGATCGACGA ATACACCAAG
TTCGTCGCCA TCTATGGCGC CCGCGGCCTC GCCTACATCA AGGTCAACGA CGTCACCCAG
CCCAACGAGC ACGGCCTGCA GTCGCCGATC GTCAAGAACC TGCACGAGAC CGCGCTGCGC
ACCATCCTCG AGCGCACCGG CGCGCAGTCG GGCGACCTGA TCTTCTTCGG CGCCGACAAG
ACCAAGGTGG TCAACGACGC CATGGGCGCG CTGCGCATCA AGCTCGGCCA CGAGAAGGGC
TACGTCACCG GCGAGGCCTG GCGTCCGCTG TGGGTGGTCG ACTTCCCGAT GTTCGAGTAC
GACGAGGACG ACAAGCGCTG GACCGCCTGC CACCACCCCT TCACCAGCCC CAAGGACGAG
CACATCGACC TGCTCGAATC CAACCCGGGC GAGTGCCTGG CCAAGGCCTA CGACCTCGCC
TTGAACGGCT GGGAGATCGG CGGCGGCTCG GTGCGTATCC ACCGCGCCGA CGTGCAGGCG
CGCGTGTTCG AGGCACTGAA CATCGGCCCC GAGGAGCAGC AGGCCAAGTT CGGCTTCCTG
CTCGACGCGC TCAAGTACGG CGCCCCCCCG CATGGCGGCC TGGCCTTCGG CCTCGACCGC
ATCGTCACCA TGATGACCGG CGCCGAATCC ATCCGCGACG TCATCGCCTT CCCCAAGACC
CAGCGCGCCC AGTGCCTGCT CACCGACGCG CCGAGCGGCG TGGACGAGAA GCAGCTGCGC
GAGTTGCACA TCCGCCTGCG CCAGAAGGTC GAGACCCAGG TCGAAGTCGA GCGCGGCTGA
 
Protein sequence
MRTHYCGKVT AADLDQIVTI CGWVHRRRDH GGVIFIDLRD REGLVQVVCD PDRAEMFKTA 
ESVRNEFVLK LSGKVRRRPA GTENANLVSG EIEILCHDIE VLNAAATPPF QLDDENLSET
VRLTNRVIDL RRPQMQKNLM LRYKTTMAFR RFLDGAGFID VETPMLTKST PEGARDYLVP
SRVHPGQFFA LPQSPQLFKQ LLMVAGYDRY YQIVKCFRDE DLRADRQPEF TQVDLETSFM
NEHEITALVE EMIRYVFKEA MAVELPAPFP RMTYAEAMRR YGSDKPDLRV TLELTDVTDA
VQDVAFKVFS GPATSGGRVA AMRVPGGNSL TRGEIDEYTK FVAIYGARGL AYIKVNDVTQ
PNEHGLQSPI VKNLHETALR TILERTGAQS GDLIFFGADK TKVVNDAMGA LRIKLGHEKG
YVTGEAWRPL WVVDFPMFEY DEDDKRWTAC HHPFTSPKDE HIDLLESNPG ECLAKAYDLA
LNGWEIGGGS VRIHRADVQA RVFEALNIGP EEQQAKFGFL LDALKYGAPP HGGLAFGLDR
IVTMMTGAES IRDVIAFPKT QRAQCLLTDA PSGVDEKQLR ELHIRLRQKV ETQVEVERG