Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_1170 |
Symbol | aspS |
ID | 7083829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 1296132 |
End bp | 1297931 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643698185 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_002354825 |
Protein GI | 217969591 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAACTC ACTACTGCGG CAAAGTCACC GCCGCCGACC TCGACCAGAT CGTCACCATT TGCGGCTGGG TACATCGCCG CCGCGACCAC GGCGGCGTCA TCTTCATCGA CCTGCGCGAT CGCGAGGGCC TGGTGCAGGT GGTGTGCGAC CCCGACCGCG CGGAGATGTT CAAGACGGCC GAATCGGTGC GCAACGAGTT CGTCCTCAAG CTGAGCGGCA AGGTGCGCCG CCGTCCCGCC GGCACCGAGA ACGCCAACCT CGTCTCGGGC GAGATCGAGA TCCTCTGCCA CGACATCGAG GTGCTCAACG CCGCCGCCAC GCCGCCCTTC CAGCTCGACG ACGAGAACCT GTCCGAGACG GTGCGCCTGA CCAACCGCGT CATCGACCTG CGTCGCCCGC AGATGCAGAA GAACCTGATG CTGCGCTACA AGACCACGAT GGCCTTCCGC CGCTTCCTCG ACGGCGCCGG CTTCATCGAC GTCGAGACGC CGATGCTGAC CAAGAGCACG CCCGAAGGCG CGCGCGACTA CCTGGTGCCC TCGCGCGTGC ACCCGGGCCA GTTCTTCGCC TTGCCGCAGT CGCCCCAGCT CTTCAAGCAG CTGCTGATGG TGGCCGGCTA CGACCGCTAC TACCAGATCG TCAAGTGCTT CCGCGACGAG GACCTGCGCG CCGACCGCCA GCCCGAATTC ACCCAGGTCG ACCTCGAGAC CTCGTTCATG AACGAGCACG AGATCACCGC CCTGGTCGAG GAGATGATCC GCTACGTGTT CAAGGAAGCG ATGGCGGTCG AGCTGCCCGC GCCCTTCCCG CGCATGACCT ACGCCGAGGC GATGCGCCGC TACGGCTCGG ACAAGCCCGA CCTGCGCGTG ACGCTGGAAC TCACCGACGT CACCGACGCG GTGCAGGACG TCGCCTTCAA GGTCTTCAGC GGCCCCGCCA CCTCGGGCGG CCGCGTCGCC GCGATGCGCG TGCCGGGCGG CAACAGCCTG ACCCGCGGCG AGATCGACGA ATACACCAAG TTCGTCGCCA TCTATGGCGC CCGCGGCCTC GCCTACATCA AGGTCAACGA CGTCACCCAG CCCAACGAGC ACGGCCTGCA GTCGCCGATC GTCAAGAACC TGCACGAGAC CGCGCTGCGC ACCATCCTCG AGCGCACCGG CGCGCAGTCG GGCGACCTGA TCTTCTTCGG CGCCGACAAG ACCAAGGTGG TCAACGACGC CATGGGCGCG CTGCGCATCA AGCTCGGCCA CGAGAAGGGC TACGTCACCG GCGAGGCCTG GCGTCCGCTG TGGGTGGTCG ACTTCCCGAT GTTCGAGTAC GACGAGGACG ACAAGCGCTG GACCGCCTGC CACCACCCCT TCACCAGCCC CAAGGACGAG CACATCGACC TGCTCGAATC CAACCCGGGC GAGTGCCTGG CCAAGGCCTA CGACCTCGCC TTGAACGGCT GGGAGATCGG CGGCGGCTCG GTGCGTATCC ACCGCGCCGA CGTGCAGGCG CGCGTGTTCG AGGCACTGAA CATCGGCCCC GAGGAGCAGC AGGCCAAGTT CGGCTTCCTG CTCGACGCGC TCAAGTACGG CGCCCCCCCG CATGGCGGCC TGGCCTTCGG CCTCGACCGC ATCGTCACCA TGATGACCGG CGCCGAATCC ATCCGCGACG TCATCGCCTT CCCCAAGACC CAGCGCGCCC AGTGCCTGCT CACCGACGCG CCGAGCGGCG TGGACGAGAA GCAGCTGCGC GAGTTGCACA TCCGCCTGCG CCAGAAGGTC GAGACCCAGG TCGAAGTCGA GCGCGGCTGA
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Protein sequence | MRTHYCGKVT AADLDQIVTI CGWVHRRRDH GGVIFIDLRD REGLVQVVCD PDRAEMFKTA ESVRNEFVLK LSGKVRRRPA GTENANLVSG EIEILCHDIE VLNAAATPPF QLDDENLSET VRLTNRVIDL RRPQMQKNLM LRYKTTMAFR RFLDGAGFID VETPMLTKST PEGARDYLVP SRVHPGQFFA LPQSPQLFKQ LLMVAGYDRY YQIVKCFRDE DLRADRQPEF TQVDLETSFM NEHEITALVE EMIRYVFKEA MAVELPAPFP RMTYAEAMRR YGSDKPDLRV TLELTDVTDA VQDVAFKVFS GPATSGGRVA AMRVPGGNSL TRGEIDEYTK FVAIYGARGL AYIKVNDVTQ PNEHGLQSPI VKNLHETALR TILERTGAQS GDLIFFGADK TKVVNDAMGA LRIKLGHEKG YVTGEAWRPL WVVDFPMFEY DEDDKRWTAC HHPFTSPKDE HIDLLESNPG ECLAKAYDLA LNGWEIGGGS VRIHRADVQA RVFEALNIGP EEQQAKFGFL LDALKYGAPP HGGLAFGLDR IVTMMTGAES IRDVIAFPKT QRAQCLLTDA PSGVDEKQLR ELHIRLRQKV ETQVEVERG
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