| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1069 |
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| Symbol | |
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| ID | 7084053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 1166630 |
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| End bp | 1167748 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643698087 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_002354727 |
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| Protein GI | 217969493 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.992947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAGA AACTGATCGC GCTGGCTGTT GCTGGCCTCG TTTCGGCCCC GGCCTTCGCT
CAGTCGAACG TGACCATCTA CGGTGTGGCT GACGCTTACA TGGGCTTCGG TTCGCACGGT
GACAATGACA AGGCCGCTAT CAACAGCGAT GGCCTGTCGG GCAGCCGTCT GGGCTTCCGC
GGCGTCGAAG ATCTGGGTAA CGGCCTGAAG GGTGTGTTCA CCGTTGAGCA AGGCTTCGAC
ATTTCGAACG GTACGGGCAT GGGCAACGCC TCCCGTCAGG CTTTTGTCGG TCTCGGTGGT
TCGTTCGGTA CCGTCAGCCT CGGCCGTCAG TACGCTCCTG GCTATGACTT CCAATACGAC
GTCACCGCCA GCGCCCCGAT CGGTCCCCAG TCGATCCTGT CGAACCAGTC GGGCATGACC
ATCACCCCGA ACAGCGGCGC TCGTTGGGAC AACTCGGTCG CTTACAACGG TTCGTTCTCG
GGCCTGAAGG TCCGTGCGAT CTATGGCATG GGCGGCAACG AAGACACCTA TGAAGTTGTT
ACGGCTGTTG ATCCGGTCAC GGGTCTGCCG ACCGCTAGCA AGCTGATGGA TCCGCAGGAT
GACGATCGCT TCGGCCTGGG GGTTGAGTAC GGCAATGGCC CGCTTAAGGT TGGTGCTGTC
TATCACTACC TGAAGGACGG CGCCGACATC AATGGTCTGT CCGATGACCA GCAGGAATGG
CTGGTTGGCG GTAGCTACAA CTTCGGCGTG CTGACCCTGG CTGGTTCGTA CCAAGAAGTC
GAGGGCATTG GCAACCTGAA GGGTGTTGAT GCTGACCTGT GGCAGATTGG TGTGCTCGTC
CCCGTTGGCG CTGCTGGCAA TGTGCACTTG GCCTACGGCG AAGTTGACTT TGACATCAAC
GCCATGGGCG TGAACGAAAG CGCTAAGGCC AAGTCTTACA CCCTGGCTTA CACCCACGCT
CTGTCGAAGC GCACCACCGC CTACGCTGGT TGGAACCGCA CTGACAACGA CAATGGCCTG
GATCTGGGTC TGGTTGACTA CATCCAACCC GCTGGCGCCA CCACTTACGG CGGTGACGAG
TCCGACCTGT TCTTCGTCGG TATGCGTCAC ACCTTCTAA
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| Protein sequence | MQKKLIALAV AGLVSAPAFA QSNVTIYGVA DAYMGFGSHG DNDKAAINSD GLSGSRLGFR
GVEDLGNGLK GVFTVEQGFD ISNGTGMGNA SRQAFVGLGG SFGTVSLGRQ YAPGYDFQYD
VTASAPIGPQ SILSNQSGMT ITPNSGARWD NSVAYNGSFS GLKVRAIYGM GGNEDTYEVV
TAVDPVTGLP TASKLMDPQD DDRFGLGVEY GNGPLKVGAV YHYLKDGADI NGLSDDQQEW
LVGGSYNFGV LTLAGSYQEV EGIGNLKGVD ADLWQIGVLV PVGAAGNVHL AYGEVDFDIN
AMGVNESAKA KSYTLAYTHA LSKRTTAYAG WNRTDNDNGL DLGLVDYIQP AGATTYGGDE
SDLFFVGMRH TF
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