Gene Tmz1t_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1020 
Symbol 
ID7084004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp1116665 
End bp1117702 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content66% 
IMG OID643698039 
Producthypothetical protein 
Protein accessionYP_002354679 
Protein GI217969445 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTC CAAACCTCCT CTCCAGAAAA ACCCGTTGGG TCGTGATCGC CGTCGTCTTG 
CTCGCTCTTG GCGGCGCACT GGCGTTCTGG CTGTCGCGCG ACCATGGACA ACAAGATGCA
TTGCGCCTCT ACGGCAACGT CGATATCCGC GAGGTGCAAC TGGCCTTCCG TCAGCCCGGG
CGCGTGATGC AAATGGCTTT CGACGAGGGC GATGCCGTCA GCGTGGGCGC GCGCCTGGCG
GCGCTTGACG CGCAACCCTA TCGGGAAGCC CTTGCGGCAG CGCAGGCCCA GGTGCAGGTG
GCGCAGGCGG AACTGGCCAA GCTGCGCCGC GGCCTGCGAC CGCAGGAAAT CACCCAGGCG
CGCGAGGCCC TCAGGCAGGC ACAGGCGCTC GCCACCGAGA CCGAGCGGAA TTTCAAGCGC
CAGAGTGGCC TGCTGACATC GGGTGCCAGC AGCCAGCGTA CGGTCGATGC CGCCCGCACG
GCGCGAGACC AGGCAGCCGC TGGCGTCGAA GCAGCGAAGG CGGCCCTGTC GCAAGCATCC
GAAGGCTTCC GCAAGGAAGA CATCGCCGCG GCAGAAGCTC GCCTTGCGGC CGCTCAGGCT
GCCGCAGCGC AAGCCACGAC AGCCTTGGCG GACACCGAAT TGGTGGCGCC CAGTAGTGGC
ACCGTCATCG CACGGGTGCG CGAGCCCGGC AGCATGGTTG CAAGCCAGAG CGCGGTCTAC
AGCCTGAGCC TGGACAAGCC GGTTTACGTG CGCGCCTACG TGGGCGAGTC GGACTTGGGG
CGCATCGCGC CCGGTACTGT GGTACGCGTC AAAAGCGATT CATCAGAGAA GGTCTATCGC
GGCCAGATCG GCTTCATCTC GCCGCGCGCC GAGTTCACCC CCAAGACGGT GGAGACGACG
GATTTGCGCA CGGATCTGGT GTACCGCCTG CGCATCGTCA TCGACGAAGC CGACAGCGAC
AGTGCCTTGC GCCAGGGCAT GCCGGTGACG ATCGAGGTCG ATGCGAAAGC CGGCACCGGT
ATCCCGGGGG AGCGGTGA
 
Protein sequence
MKTPNLLSRK TRWVVIAVVL LALGGALAFW LSRDHGQQDA LRLYGNVDIR EVQLAFRQPG 
RVMQMAFDEG DAVSVGARLA ALDAQPYREA LAAAQAQVQV AQAELAKLRR GLRPQEITQA
REALRQAQAL ATETERNFKR QSGLLTSGAS SQRTVDAART ARDQAAAGVE AAKAALSQAS
EGFRKEDIAA AEARLAAAQA AAAQATTALA DTELVAPSSG TVIARVREPG SMVASQSAVY
SLSLDKPVYV RAYVGESDLG RIAPGTVVRV KSDSSEKVYR GQIGFISPRA EFTPKTVETT
DLRTDLVYRL RIVIDEADSD SALRQGMPVT IEVDAKAGTG IPGER