Gene Tmz1t_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1000 
Symbol 
ID7083984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp1100528 
End bp1100746 
Gene Length219 bp 
Protein Length72 aa 
Translation table11 
GC content66% 
IMG OID643698022 
Productphage transcriptional regulator, AlpA 
Protein accessionYP_002354662 
Protein GI217969428 
COG category[K] Transcription 
COG ID[COG3311] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCGC AGACCATCGC GCCGGCCTTG CCGCCCGAGC ACCGCATCCT GCGCCGCGCC 
GAGGTCGAAG CCAAGACCGG CTTCAAGCGC GCGCACATCT ACAGCCTGAT GAAGGAAGGC
AAGTTCCCCA AGGCGCTGCG CCTGGGCGTG CGCGCGGTGG GCTGGGACTC GGTGGAGATC
GAACAGTGGA TCGCTGATCG CCTCAAAGAA CGCGCCTGA
 
Protein sequence
MSSQTIAPAL PPEHRILRRA EVEAKTGFKR AHIYSLMKEG KFPKALRLGV RAVGWDSVEI 
EQWIADRLKE RA