Gene Tmz1t_0925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0925 
Symbol 
ID7085028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp1015200 
End bp1015874 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content69% 
IMG OID643697948 
Productphosphoglycolate phosphatase 
Protein accessionYP_002354588 
Protein GI217969354 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGCGC GCTTCGCGCC GCGCGCGGTG CTGTTCGACC TCGACGGCAC CCTGCTCGAC 
ACCATCGCCG ACCTCGCCGA CGCCGCCAAC CTCATGCTCG CCGAGCTCGC CCGCCCGGCG
CGCAGCCTGG AGGAGATCCA CAGCTTCGTC GGCAAGGGCA TTCCCAACCT GGTGCGGCGC
TGCCTCACCG AGGGCACGCA CGCCGATGAG GACGAGATCG ACTCCGCCGT GGCCGTGTTC
CGCCGCCACT ATGCTGTGGT CAACGGCGCG CGCACGCGCA TCTACCCCGG GGTCGGCGAA
CTGCTCGAGC GCCTGCGCGG ACACGGGCTG CCGCTGGCGG TGGTCACCAA CAAGGCCGAG
GCCTTCACGC TGCCGTTGCT CGAGCGCATG GCGATTGCGC ACTATTTCGA CGCCGTGGTC
AGCGGCGACA CCTTGCCGGT CAAGAAACCC GACCCGGCGA TGCTGCACCT GGCCTGCGCG
CGCCTCGGCG TGGCCGCCCG GCAGGCGCTG ATGGTCGGCG ACTCGGCCAA CGACGCCTTC
GCCGCGCGCG ACGCGGGCAT GCCGGTGCTG CTGGTGCGTT ACGGCTACAG CGAAGGCATG
CCGGTGGACA GCATCGAATG CGATGGGCTA CTATCGAACG CACTCGAAGT GTTGGACCAT
ATCGGTCCTG CATAG
 
Protein sequence
MDARFAPRAV LFDLDGTLLD TIADLADAAN LMLAELARPA RSLEEIHSFV GKGIPNLVRR 
CLTEGTHADE DEIDSAVAVF RRHYAVVNGA RTRIYPGVGE LLERLRGHGL PLAVVTNKAE
AFTLPLLERM AIAHYFDAVV SGDTLPVKKP DPAMLHLACA RLGVAARQAL MVGDSANDAF
AARDAGMPVL LVRYGYSEGM PVDSIECDGL LSNALEVLDH IGPA