| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0887 |
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| Symbol | |
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| ID | 7084745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 981281 |
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| End bp | 983158 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643697910 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_002354550 |
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| Protein GI | 217969316 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02519] pilus (MSHA type) biogenesis protein MshL |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0606978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATGCA CATCGACCGA CCTGCGCAGG CTGCTCGCGA CCGCGGCGCT TCTGGCGACC
GCTGCATGTG CGCCGCTCGG CCGCCCGCCC GCACTCGAGG GGCATCTCGA CAAGCGCACC
GCGATCGAGC GCACCGCGCC TGTCGGCACG GCGACAAGAA GCCTCGCGCC GCCGATCGCG
GAGTCGCCTT CTTCCAGCCG AGGTGCTGCA GCGAGCGCGG CGACGGGCGC GCCTCCGCCC
GCTCCGGCCC GCGGGCGAGC AGCTCCCGCG GTGCGCGGAT ACTCGATCGA CGTTTTCGAC
ATCCCGGCCG AGCAGCTGCT GCTCGCCATC GGCCGCGACG CCGGGCTGGA GCTCGACCTC
CATGCCGGAA TCACCGGAAA CGTCAGCCTG CAGGCCCACG ACCGCCCGCT CGGCGAGCTG
CTGGAGCGCA TCGCCCGCCA GGTCGACCTG CGCTATGAGC TGCGCGGCCG CCACCTGCGC
GTGCGCCCCG ACACCCCCTA CATCCGCAGC TATGCGGTGG ACTATGTGAA CCTGAGCCGC
GACATGCACG GCACCGTCGC CACCAGCACG CAGATCGCCA CCTCGGGCAG CGCCGGCGGC
GCCGGTCAGC GCGCGTCTTC GACAGGCGGC GCTGGCAACG CCTCGATCAC CCAGATCGAG
ACGCGCTCGG CCAACGACTT CTGGAACACG CTCGAGCACA ACCTCGCCGC CATCCTCGCC
GGGCCGGGGC GCGCGCCCGA CTGCGGGGGC GAGCGCCGCG GCGAGTCCCC CGCCGGCTGC
CGCAACGCCG ACCTGATGCT CAACCGCGAG AGCGGCATCG TCATGGCGCG CGCCACCCAG
CGCCAGCACG AGCAGCTGGA GGCCTTCCTC GCGGGGGTGC AGCGCGCGGC GCGGCGCCAG
GTGATGATCG AAGCCACGAT CGTCGAGGTC ACCCTCGCCG ACGGCTACCG CCAGGGCATC
GACTGGACCC GGCTCGGCGT GCCGAGCTGG AGCGTGCGCC CGCGCGGCAG CGGCGACGCC
ACATCCGGCC AGCCCACGCT GAGCTACCTG TCGGCCAACT CCGACATCCG TCTCGAACTG
CTGGAGACCT TCGGCACCGT CAAGGTGCTC TCCAGCCCGC GCCTGTCGGT GCTCAACAAC
CAGACCGCGA TGCTCAAGGT CGTCGAGGAG GTCGTCTACT TCCTCGTAGA CAGCACCACC
ACCGAGTACG ACGACCGCAA GCAGGCCCGC ATCTCCGCGA CCACCACGCC GCAATCGGTC
TCGGTCGGCA TGGTCATGTC GGTCACGCCA CAGATCTCCG CCGACGGCGA CATCACCCTC
AACGTGCGGC CGACCATCTC GGGCATCTCC GGCTTCAAGG ACGACCCCAA CCCCTCGCTC
GGCGACATCC CCAACCGCGT GCCGCAGATC CGCACACGCG AAATCGAGTC CATGCTGCGC
CTGCGCAGCG GCGAGGTCGC CGTCCTCGGC GGGCTGATGG AGGACCGCAT CGACCACGAC
ACCGGCCGCA TCCCGCTGTT CGGCGACCTG CCCGTGGTCG GCGAACTATT CACCCGCCGC
GACAACAACG TGCGCCGCAC CGAGCTGCTC ATCTTCCTGC GCCCCCTGCT GATCGACGAG
CCGGGCATGC GCGGCGGCTA CGCCGAATAC GCCGGCCACC TGCCCGACGA CGACTTCCTC
CTCGACTCGC CCTCGCCCGG CCAGCGCAAC TTCCCCCACC TGCCGCTGCG CCCGCTGCTC
GCCCCCGCAG GCGCGGTCTC CGCCGCCGAA GGCTTTTCGG AAGCGGCCTA TCCCGACCCT
GCCGATCCCC GCTCTCCTGC CGCCTCCTCC ACGTCCGCCA GCGCCGCCAA CGCGGATGCC
GGCACGAGCC CGCCATGA
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| Protein sequence | MTCTSTDLRR LLATAALLAT AACAPLGRPP ALEGHLDKRT AIERTAPVGT ATRSLAPPIA
ESPSSSRGAA ASAATGAPPP APARGRAAPA VRGYSIDVFD IPAEQLLLAI GRDAGLELDL
HAGITGNVSL QAHDRPLGEL LERIARQVDL RYELRGRHLR VRPDTPYIRS YAVDYVNLSR
DMHGTVATST QIATSGSAGG AGQRASSTGG AGNASITQIE TRSANDFWNT LEHNLAAILA
GPGRAPDCGG ERRGESPAGC RNADLMLNRE SGIVMARATQ RQHEQLEAFL AGVQRAARRQ
VMIEATIVEV TLADGYRQGI DWTRLGVPSW SVRPRGSGDA TSGQPTLSYL SANSDIRLEL
LETFGTVKVL SSPRLSVLNN QTAMLKVVEE VVYFLVDSTT TEYDDRKQAR ISATTTPQSV
SVGMVMSVTP QISADGDITL NVRPTISGIS GFKDDPNPSL GDIPNRVPQI RTREIESMLR
LRSGEVAVLG GLMEDRIDHD TGRIPLFGDL PVVGELFTRR DNNVRRTELL IFLRPLLIDE
PGMRGGYAEY AGHLPDDDFL LDSPSPGQRN FPHLPLRPLL APAGAVSAAE GFSEAAYPDP
ADPRSPAASS TSASAANADA GTSPP
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