| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0886 |
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| Symbol | |
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| ID | 7084744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 979569 |
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| End bp | 981284 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643697909 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_002354549 |
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| Protein GI | 217969315 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.135966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCTC CGCTCCCCAT CGGCCAGATC CTCATCGCCG CCGGCCTGAT CGGCGAGGAC
CAGCTCCGCA TCGCGCTCCA CGAGCAACGC GGCCGCGCCC GGCCGCTCGG CCGCGTGCTG
GTCGAACTCG GCTTCGTCAG CGAGGCCGCG CTGCGCGAGG CGCTCGCCGC ACGCAGCGGC
CTGCCCTGCG TCGACCTGGC CAGCGCGCTC GCCGACCCCG ACGCGATCGC GCGCGTGCCG
CAGGCGCTCG CAAGGCGCCA CCGCCTGCTG CCGCTCCAGT ACGACGCCGC CCGCCACCGC
CTGATCGTCG CGATGGCCGA CGCCCACGAC ATCGTCGCCC TCGACCGTCT GCGTGCCGAG
CTCGGGCCGG ACGTGCACGT CGAACTGCGC CTGGCCGGCG ACAACGAACT CGGCCGCGCG
ATCGAACAGC ACTACGGTCA GGCGAGCTCG ATCGAGGACA TGGTGCGCGA GCTCGAACGC
CGCGCCGGAC AGCCCATCGC TGGCGCGCGC GACCCGCAAC TCGTCGTGCG CCTGGTCGAC
GCCCTGCTCG CCGAGGCCGC CGCGCGCGGC GCCTCCGACC TGCACCTGGA GCCCGAGGCC
GGCTTCCTGC GCGTGCGCCA CCGCATCGAC GGCACGCTGC GCCAGGTGCG CGCGATGCAC
AAGTCGTGCT GGGCGGAGCT CGCCGTGCGC ATCAAGGTGC TCGCCGGCAT GGACATCGCC
GAGTCGCGCA GCCCGCAGGA CGGGCGCATC GGCCTTGCGC TCGGCGGCCG GCCGATCGAC
TTCCGCGTCG CCACCCAGCC CACCTTGCAC GGCGAGAACA TCGTGCTGCG CATCCTCGAC
CGCGACAAGG GCATCGTCCC GCTCGACGCG CTCGGCCTCG ACCCCGCGCA ACGCGCCGCC
CTCGACCGCA TCCTCGCCCG CCCCGAGGGC CTGATCCTGG TGGTCGGTCC CACCGGCAGC
GGCAAGACCA CGACGCTGTA CTCCATGCTC GGCCACCTCA ACACCGAGGC GGTCAACATC
ATGACTCTGG AAGATCCGGT CGAGTATCCG CTCGCGCTGA TCCGCCAGAC CCAGGTCGGC
GACGCCTCAC GGCTCGACTT CGCCGACGGC GTGCGCGCGC TGCTGCGCCA GGACCCCGAC
GTGATCCTGA TCGGCGAGAT CCGCGACGCC GACACCGCCA CCATGGCCTT GCGCGCCGCA
CTCACCGGCC ACCAGGTGTT CGCCACCCTG CACGCCAACT CGATCTTCGG CGCTCTGCCG
CGCCTGCACG AGATCGGCAT CGGCGCCGAA CTGCTCGCCG GCAACCTGTG CGGCATCCTC
GCCCAGCGCC TGGTGCGCCG GCTGTGCCCC ACCTGCCGCG AGCCGGTGCC GGACGACGCC
CCCGAGCGTC ACCTGCCCGG CCTCGCCGCC GATGCCCCGC CAGCGCCGAG CTGGCGCGCG
CGCGGCTGCC CCGAATGCGA CTTCCGCGGC TATCGCGGCC GTCTCGCGAT CATGGAGATC
CTGCCCTTCG ACGCCGAGCT CGACGAGCTC GTCGCACGCC GCGCCAGCCC GGGCGAGCTG
CGTGCAGCCG CACGCACGCG CGGCCATCGC AGTCTGGCCG AGGACGGACT GCGCCGGGTG
CTCGACGGCA ACACCAGCCT CGCCGAGCTC GCCCGCGTGG TCGACCTCTC CGCGCTCGCG
GCTACGGCGA AGACCGCGCA CGGAGGTGAG GCATGA
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| Protein sequence | MNAPLPIGQI LIAAGLIGED QLRIALHEQR GRARPLGRVL VELGFVSEAA LREALAARSG
LPCVDLASAL ADPDAIARVP QALARRHRLL PLQYDAARHR LIVAMADAHD IVALDRLRAE
LGPDVHVELR LAGDNELGRA IEQHYGQASS IEDMVRELER RAGQPIAGAR DPQLVVRLVD
ALLAEAAARG ASDLHLEPEA GFLRVRHRID GTLRQVRAMH KSCWAELAVR IKVLAGMDIA
ESRSPQDGRI GLALGGRPID FRVATQPTLH GENIVLRILD RDKGIVPLDA LGLDPAQRAA
LDRILARPEG LILVVGPTGS GKTTTLYSML GHLNTEAVNI MTLEDPVEYP LALIRQTQVG
DASRLDFADG VRALLRQDPD VILIGEIRDA DTATMALRAA LTGHQVFATL HANSIFGALP
RLHEIGIGAE LLAGNLCGIL AQRLVRRLCP TCREPVPDDA PERHLPGLAA DAPPAPSWRA
RGCPECDFRG YRGRLAIMEI LPFDAELDEL VARRASPGEL RAAARTRGHR SLAEDGLRRV
LDGNTSLAEL ARVVDLSALA ATAKTAHGGE A
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