Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_0877 |
Symbol | |
ID | 7084735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 969798 |
End bp | 970340 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643697900 |
Product | lipopolysaccharide transport periplasmic protein LptA |
Protein accession | YP_002354540 |
Protein GI | 217969306 |
COG category | [S] Function unknown |
COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000011507 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGAA TCCTCCTCGC TACCGTGGCC GCGCTGCTCG CCGCCGTCAC CACCCCGGCG CTCGCCGAGA AGGCCGACCG CGACCAGCCG GTCAACATCG AGGCCGACCG CCTCACGGTG GACGACCGCA ACAAGGTGCA CATCTTCGAG GGCAGCGTGG TCCTGACCCA GGGCACGCTC ACCATCCGCG GCGACAAGCT GGTCGTGACG CAGGACGCCG CCGGCTTCCA GAACGGCGTC GCCACCGCAG CCGGCAAGGG CTTGGCCACC TTCCGCCAGC GCCGCGACGG CAGCGCCGAA TACGTCGAAG GCGAGGCCGA ACGCATCGAG TACGACAGCC GGACCGAGAA GGCCAGGCTC TTCAACCGCG CCAAGGTGAG CAGCGGCGGC GACCAGGTCA GCGGTCACTA CATCGAGTAC GACGCGATCA CCGAGAACTA TCTCGCCACC AACGCCCCGG GCAGCCGCCA GGGTGCGCCC GCGGGCCGGG TGCGCGCGGT GATCCAGCCC AAGTCCGACG GACAGCCCTC CGGCGGACAA TGA
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Protein sequence | MKRILLATVA ALLAAVTTPA LAEKADRDQP VNIEADRLTV DDRNKVHIFE GSVVLTQGTL TIRGDKLVVT QDAAGFQNGV ATAAGKGLAT FRQRRDGSAE YVEGEAERIE YDSRTEKARL FNRAKVSSGG DQVSGHYIEY DAITENYLAT NAPGSRQGAP AGRVRAVIQP KSDGQPSGGQ
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