Gene Tmz1t_0840 details

Gene Information

• Locus tag: Tmz1t_0840
• Symbol: aroB
• ID: 7084697
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: +
• Start bp: 928734
• End bp: 929816
• Gene Length: 1083 bp
• Protein Length: 360 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 643697864
• Product: 3-dehydroquinate synthase
• Protein accession: YP_002354505
• Protein GI: 217969271
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0337] 3-dehydroquinate synthetase
• TIGRFAM ID: [TIGR01357] 3-dehydroquinate synthase

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGACCC TGAACGTGGC GCTCGGCGAG CGCGCCTATC CCATTCACAT CGGCCGCGGC 
CTGCTCGGAC GCACCGACCT GATCCTCCCC CACCTCAAGA CGCGGCGCGT CGCGATCGTC 
ACCAACGCGG TGGTGGGGCC GCTCTACCTC GAGCGTCTGC GCGCCGGGCT GGAAGGGGCG 
GGGGTGCGCA CCGCAGCGGT GGTGCTGCCC GACGGCGAGG CGCACAAGGA CTGGGAGACG 
CTCAACCGCA TCTTCGACAT GCTGCTCGCG GAGCGCTGCG AGCGCTCGAC CACCCTGGTC 
GCGCTCGGCG GCGGGGTGGT GGGCGACATG GGCGGCTTCG CCGCGGCCTG CTACCAGCGC 
GGCATGCCCT TCATCCAGGT GCCGACTACG CTGCTCTCGC AGGTCGACTC CTCGGTGGGC 
GGCAAGACCG CGATCAACCA CCCGCTCGGC AAGAACATGA TCGGCGCCTT CTACCAGCCC 
AGTATGGTGC TGGCCGACAT CGACACCCTC GACACCCTGC CCGACCGCGA GCTCTCCGCC 
GGCCTGGCCG AGGTCATCAA GTACGGGCTG ATCCGCGACC CCGAGTTCCT CGCCTGGCTG 
GAGGTCAACC TCGACCGCCT GGTGGCGCGC GACACCGACG CGCTGGCGTG GGCGATCGAG 
CGCTCCTGCC GCAACAAGGC CGAGGTGGTG GCGGCCGACG AGACCGAGCA GGGCGAGCGC 
GCGCTGCTCA ACCTCGGCCA CACCTTCGGT CATGCCATCG AGACCGGCCT CGGCTACGGC 
GAGTGGCTGC ACGGCGAGGC CGTTGCCGCC GGCACGATGA TGGCCGCCGA GCTGTCGTGC 
CGCCTGGGCT GGATCGACGC CGCCGCGGTG GCGCGCATCG AGGCGCTGTT CGAGCGCGCT 
CGCCTGCCGG TGTGGGGGCC GCGGCTCGGT GTCGAGCGCT ACGTCGAGCT GATGTCGCAC 
GACAAGAAGG TCGAGGCCGG CAAGCTGCGC CTGGTACTGC TGCGCGAGAT GGGGCGCGCG 
GTGATGCACG GCGAGGCGCC GGCCTCCGAG ATCGCCGCGG CGATCGAGGC GCGCTGCCGC 
TGA 

 

Protein sequence

MQTLNVALGE RAYPIHIGRG LLGRTDLILP HLKTRRVAIV TNAVVGPLYL ERLRAGLEGA 
GVRTAAVVLP DGEAHKDWET LNRIFDMLLA ERCERSTTLV ALGGGVVGDM GGFAAACYQR 
GMPFIQVPTT LLSQVDSSVG GKTAINHPLG KNMIGAFYQP SMVLADIDTL DTLPDRELSA 
GLAEVIKYGL IRDPEFLAWL EVNLDRLVAR DTDALAWAIE RSCRNKAEVV AADETEQGER 
ALLNLGHTFG HAIETGLGYG EWLHGEAVAA GTMMAAELSC RLGWIDAAAV ARIEALFERA 
RLPVWGPRLG VERYVELMSH DKKVEAGKLR LVLLREMGRA VMHGEAPASE IAAAIEARCR