Gene Tmz1t_0804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0804 
Symbol 
ID7084196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand+ 
Start bp888309 
End bp888992 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content68% 
IMG OID643697828 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002354469 
Protein GI217969235 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGATCT CGATGACTTC GACCCCGCCC GCGCCGACCA ACGACACCCG CGACCGCATC 
CTCGATGCAG CCGAGCGCCT TTTCGTGGAG AACGGCTTCG ACGGCACTTC GATGCGCATG 
ATCACCGGCG CAGCGAACGC CAACCTCGCC GCGATCAATT ACCACTTCGG CGGCAAGGAC 
GCGCTGGTGC AGGAGGTCTT CCGCCGCCGT CTCGCCGCCC TCAACGCGCG CCGCCTCGAC 
GAACTCGACC GCCTGGAGGC CGAGGCCGCG GGAGCCCCGC TCAAGCCCAG CCGCATCGTC 
GAGGCCTTCT TCGGCACCGC GCTGGAACTC GCCGCCGACA CCGAGCACGG CGGGCGCACC 
TTCATGCGCC TGCTCGCGCG TACCTACAAT GAGCCCAACG CCTTCGTGCG CCAGTTCCTC 
GCAGAGGAGT ACGCCGAGGT GATGGATCGC TTCCTTGGCG CGCTCTTCCG CGCCCTGCCC 
GAGGTGCCGC GCGCAGAGAT CCTGTGGCGC TTCCACTTCA TGATCGGTGC GATGGCCTTT 
GCGATCGCCG GACTCGGCGG ATTGAGCGAA TTGATGGAAG TGGGGCCGCA GGACGAGGAT 
CCCGCCCGGC TGCTGCCGCG CCTGATGAGT TTCCTGCTCG GCGGCCTGCG TGCGCCCCTG 
CCCGACGGTG GTCTGCAAGG CTGA
 
Protein sequence
MLISMTSTPP APTNDTRDRI LDAAERLFVE NGFDGTSMRM ITGAANANLA AINYHFGGKD 
ALVQEVFRRR LAALNARRLD ELDRLEAEAA GAPLKPSRIV EAFFGTALEL AADTEHGGRT 
FMRLLARTYN EPNAFVRQFL AEEYAEVMDR FLGALFRALP EVPRAEILWR FHFMIGAMAF 
AIAGLGGLSE LMEVGPQDED PARLLPRLMS FLLGGLRAPL PDGGLQG