| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0570 |
|---|
| Symbol | |
|---|
| ID | 7085184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 644045 |
|---|
| End bp | 647770 |
|---|
| Gene Length | 3726 bp |
|---|
| Protein Length | 1241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643697597 |
|---|
| Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
|---|
| Protein accession | YP_002354239 |
|---|
| Protein GI | 217969005 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGACA ACATCCCCTC CAGCGCCCGC GCCGCAGCGG CCCTAGATGC CGCCGCCGCC
CTTCCGCCGA CCGCGCGCAG CACCGTCCGC CACGCCATCG ACGCCGCTTG GCGCACGCCC
GAGCCGGAGT GCGTGCCCGC GCTCGTCGAG GCCGCCCGCC TCCCCGCGGC CCTGCGCGAA
CCCGTGCGCG CCCTCGCCCA CGACCTCGTC GTCGGCCTGC GCGCCACGCG CACGCGCTCG
TCCGGCGTCG ACGCCCTGAT GAAGGAATTC TCGCTCTCCA GCCAGGAAGG CGTGGCGCTG
ATGTGCCTGG CCGAGGCCCT GCTGCGCGTG CCCGACAAGG CCACCGCCGA CCGCCTGATC
CGCGACAAGC TCGCCGACGG CGACTGGCGC GCACACATCG GCAACAGCCC CTCGCTGTTC
GTCAACGCTG CCACCTGGGG CCTGCTGATC ACCGGCCGGC TGGTGTCGAC CAGCAGCGAA
CAAGGCCTGT CCTCCGCGCT CACCCGCCTG GTGGCGCGCG GCGGCGAGCC GCTGATCCGC
AAGGGCATGG ACCTGGCGAT GCGCATGCTC GGCGAGCAGT TCGTCACCGG GCGCGACATC
GACGAGGCCC TCGAGCGCGG CCGCGAGCAC GAGAACAAGG GTTACCGCTA CTCCTTCGAC
ATGCTCGGCG AGGCGGCGAT GACGGCAAGC GACGCAGAGC GCTATTTCCG CGACTACGAG
CGCGCCATCC AGGCCATCGG CGTCGCCTCC CGGGGCCGCG GCGTGGTCGA CGGCAACGGC
ATCTCGGTCA AGCTCTCGGC CCTGCATCCG CGCTACACCT GGTCGCAGCG CGAGCGCGTG
CTGGCCGAGC TGCTGCCGAA GTTGAAGACC CTGTGCCTGC AGGCCAGGCG CCACGACATC
GGGCTGAACA TCGACGCCGA GGAGGCCGAC CGCCTCGACC TCTCGCTCGA CCTGCTCGAG
GCGCTCGCCA CCGACGACGC GCTCGCCGGC TGGACGGGAC TGGGCTTCGT GGTCCAGGCC
TACCAGAAGC GCGCCCCCCA CGTGCTCGAC TTCGTCATCG ACCTCGCGCG CCGCAGCGGC
CAGCGCATGA TGGTGCGCCT GGTCAAGGGC GCGTACTGGG ACGCCGAGAT CAAGCGCGCG
CAGATCGACG GGCTGGCCGG CTACCCGGTG TACTCGCGCA AGGTGTACAC TGATGTGTCC
TACCTCGCCT GCGCGAAGAA GCTGCTCGCC GCACGCGACG TCATCTACCC GCAGTTCGCC
ACCCACAACG CACATTCGCT GGCGGCGATC TTCCACCTCG CCGCCGCCGA CGGCCGCGCA
TGGCAGCCGG GCGACTACGA GTTCCAGTGT CTGCACGGCA TGGGCGAGCC GCTCTACGAC
CAGATCGTCG GCCGCGCCGA CCGTCACCGC CTGGTGCGCA TCTACGCCCC GGTGGGCAGC
CACGAGACCC TGCTCGCCTA TCTGGTGCGC CGCCTGCTCG AGAACGGCGC CAACACCAGC
TTCGTGAACC GCATCGTCGA CGAGCGCGTG CCGGTGGAGG AGCTGATTGC CGACCCGGTC
GAGCAGGCCG CCCCGCTCGC CGGCGCGCCG CATCCGAAGA TTGCGCTGCC CGCCGAGCTG
TTCGGTGGCC TGCGCACCAA CTCCGCCGGC ATCGACCTCG CCAGCGAGCC GGTGCGCGCC
CGCATCGCCG CGGCGCTGGC CAACTCGCGC ACCACGCCCT TCGCGGCCGG TCCGATCGTC
GCCGGCCGCA GCGCGGTGCC CGCGGACGTG ACCCCGGTCT CCAACCCGGC CGACCGCGGC
GAGGTCGTCG GCGGCGTCGC CGAAGCGACG ACCGACGACC TCGAGCACGC GCTCGCCGCC
GCCAGTGCGG CCGCAGCCGA CTGGGCCGCC ACCCCGGCTG CGGCGCGCAG CGAACGCCTG
GAGCGCGCCG CGGCGCTGTT CGAACGCGAG GCCGACACCC TGCTCGCGCT TGCAGTGCGC
GAAGCCGGCA AGTCGTGGGC CAACGCGGTG GCCGAGCTGC GCGAGGCGGT CGACTTCCTG
CGCTACTACG CCCAGCAGGC GCGTGGCTTC GACCCTGCCA GCCACGTGGC GCTCGGTCCG
GTGCTGTGCA TCAGCCCGTG GAACTTCCCG CTGGCGATTT TCAGCGGCCA GGTCGCCGCC
GCGCTCGCCG CCGGCAATCC GGTGCTCGCC AAGCCGGCCG AGCAGACCCC GCTGATCGCC
GCCCATGCAG TGCGCCTGCT GCACGAGGCC GGCATCCCGG CTGCAGCGCT GCAGTTGCTG
CCCGGCCGCG GCGAGACCGT CGGCGCCGCG CTGGTGGCCG ATGCGCGCGT GCGTGGGGTG
ATGTTCACCG GCTCCACCGA GGTCGCCGCG CTGATCAACC GCAGCCTCGC CGCGCGTGGC
GGCAAGGTGC CGCTGATCGC CGAGACCGGC GGCCAGAACG CGATGATCGT GGACTCCACC
GCACTCCCCG AGCAGGTGGT GACGGACGTC CTCGCCTCCG CCTTCGACTC CGCCGGCCAG
CGCTGCTCGG CGCTGCGCGT GCTGTGCCTG CAGCAGGACA TCGCCGACGA CGTCCTCCAC
ATGCTGCAGG GCGCGCTCGC CGAACTGCGC CTGGGCAATC CGGCGGACGT GCGCGTGGAC
ATCGGCCCGG TCATCGACGC CGGGGCGCGC GACGGTCTCG AGGCCCACGT CGCCGCGATG
CTTGCCAAGG GCGCCCGCAT CACCCGCCTG CCGCTGCCCG CCGCATGCGC GCACGGCACC
TTCGTCGCGC CGTCGATCAT CGAGATCGGT GCCCTGAGCG AACTGGGCCG CGAGCAGTTC
GGCCCCATCC TGCACGTGCT GCGCTACCGC GCGTCCGAAT TGGACAGCCT GATCGACGCG
ATCGACGCCA GCGGCTACGG CCTCACCATG GGGGTGCACA CCCGCATCGA CGAGACCGTG
GAGCGCGTCG CCGCGCGCGC GCACGTCGGC AACCTGTATG TGAACCGCAA CATCATCGGC
GCGGTGGTGG GCGTGCAGCC CTTCGGCGGC GAGGGCCTGT CCGGCACCGG CCCGAAGGCG
GGCGGACCGC TCTACCTGCA CCGGCTGCTT GCGCGTACGC CCGGCCCGGT GCTGGCCGAT
GGCGCGCTCG CGGTGACCGA CAGCGACGAA ACCCGCGCCG CGGATGCCGC GTTCTCCGGC
TTCCTGGAAT GGCTGGACGG CGCCGGCCGC GGCCTGCTCG AGGGCGACGA GCTCGCCGCG
CTACGCGACC GCGCCGACGC CTGCCGTGCG CGCCGTATTG CTGGCCTGCG CCTGGCGCTG
CCCGGCCCCA CCGGCGAGGA CGACAGCCTG CGCTTCACCG CGCGCGGCAC CATCGCCGGC
GTGGCGGACA GCGCGGCCGC CGTGCTGCAT CAGGTGATGG CGGCGCTCGC CAGCGGCAAT
CGCCTGCTGC TCGCCGACCG CGCCGCCGCA CGCACGGTGC AGGCCGCGCT CCCCGAGGCG
CTGCGCGCAT ACGTCGCGGT GGATGCCGCC TGGTTCGACA AGGCGCTCGG CGCGGTGCTG
TTCGACGGCA GCGACGCCGA GGCCGACGCG CTGCAGGTGC GCGTCGCCGG GCGCAGCGGC
CCGATCCTGC AGCTGCTGCA GCCCTGCCCC GACTACGACC TCGGCCGCCT GGTGCACGAA
CGCACCCTGT CGATCAACAC CGCCGCCGCG GGTGGCAACG CCAGCCTGAT GGCGATGGGG
GCATGA
|
|---|
| Protein sequence | MTDNIPSSAR AAAALDAAAA LPPTARSTVR HAIDAAWRTP EPECVPALVE AARLPAALRE
PVRALAHDLV VGLRATRTRS SGVDALMKEF SLSSQEGVAL MCLAEALLRV PDKATADRLI
RDKLADGDWR AHIGNSPSLF VNAATWGLLI TGRLVSTSSE QGLSSALTRL VARGGEPLIR
KGMDLAMRML GEQFVTGRDI DEALERGREH ENKGYRYSFD MLGEAAMTAS DAERYFRDYE
RAIQAIGVAS RGRGVVDGNG ISVKLSALHP RYTWSQRERV LAELLPKLKT LCLQARRHDI
GLNIDAEEAD RLDLSLDLLE ALATDDALAG WTGLGFVVQA YQKRAPHVLD FVIDLARRSG
QRMMVRLVKG AYWDAEIKRA QIDGLAGYPV YSRKVYTDVS YLACAKKLLA ARDVIYPQFA
THNAHSLAAI FHLAAADGRA WQPGDYEFQC LHGMGEPLYD QIVGRADRHR LVRIYAPVGS
HETLLAYLVR RLLENGANTS FVNRIVDERV PVEELIADPV EQAAPLAGAP HPKIALPAEL
FGGLRTNSAG IDLASEPVRA RIAAALANSR TTPFAAGPIV AGRSAVPADV TPVSNPADRG
EVVGGVAEAT TDDLEHALAA ASAAAADWAA TPAAARSERL ERAAALFERE ADTLLALAVR
EAGKSWANAV AELREAVDFL RYYAQQARGF DPASHVALGP VLCISPWNFP LAIFSGQVAA
ALAAGNPVLA KPAEQTPLIA AHAVRLLHEA GIPAAALQLL PGRGETVGAA LVADARVRGV
MFTGSTEVAA LINRSLAARG GKVPLIAETG GQNAMIVDST ALPEQVVTDV LASAFDSAGQ
RCSALRVLCL QQDIADDVLH MLQGALAELR LGNPADVRVD IGPVIDAGAR DGLEAHVAAM
LAKGARITRL PLPAACAHGT FVAPSIIEIG ALSELGREQF GPILHVLRYR ASELDSLIDA
IDASGYGLTM GVHTRIDETV ERVAARAHVG NLYVNRNIIG AVVGVQPFGG EGLSGTGPKA
GGPLYLHRLL ARTPGPVLAD GALAVTDSDE TRAADAAFSG FLEWLDGAGR GLLEGDELAA
LRDRADACRA RRIAGLRLAL PGPTGEDDSL RFTARGTIAG VADSAAAVLH QVMAALASGN
RLLLADRAAA RTVQAALPEA LRAYVAVDAA WFDKALGAVL FDGSDAEADA LQVRVAGRSG
PILQLLQPCP DYDLGRLVHE RTLSINTAAA GGNASLMAMG A
|
|---|
| |