Gene Tmz1t_0565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0565 
Symbol 
ID7085179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp638607 
End bp639323 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content69% 
IMG OID643697592 
ProductABC transporter related 
Protein accessionYP_002354234 
Protein GI217969000 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCTCA AGATGGAGGG CGTGCACGCC CATTACGGCC ACATCCACGC GCTGCGCGGC 
ATCGACGTCG AGGTCCAGGT GGGCGAGATC GTCACCTTGA TCGGCGCCAA CGGCGCCGGC
AAATCGACGC TGATGATGAG CCTGTTCGGC AACCCCAAGG CCAGCGCCGG GCGCATCGTC
TTCGACGGCG AGGACATCAC CCGCGTGCAC ACGCACGAGA TCGCCCGCCG CGGCATCGCC
CTGGTGCCCG AAGGCCGGCG CATCTTCCCG CGCATGACGG TGATCGAGAA CCTGCAGATG
GGCACCGCCC ACGCCGACCC GGCCAACTAC GCCGCCGACA CCGCGCGCGT GTTCGCGATG
TTCCCGATCC TGCAGGAACG CCAGGCGCAG CGCGCCGGCA CCCTGTCGGG CGGCGAGCAG
CAGATGCTGG CGATCGGCCG CGCGCTGATG AGCCGCCCCA AGCTGCTGCT GCTCGACGAG
CCCTCGCTCG GCCTGGCGCC GATCTACATC CGCAAGATCT TCCAGATCGT CAGGGAGCTC
AACCGCGACC ACGGCATGAC CATCCTGCTG GTCGAGCAGA ACGCCAACCA GGCCCTGCGC
GTGGCCGACC GCGGCTATGT GCTGCAGCAC GGCGAGATCA CCCTCGCCGG GACCGGGGCG
GAACTGCTGG CGAGTCCGGA GGTGCGGGCG GCGTATCTGG AGGGCGGCCA CGCCTGA
 
Protein sequence
MMLKMEGVHA HYGHIHALRG IDVEVQVGEI VTLIGANGAG KSTLMMSLFG NPKASAGRIV 
FDGEDITRVH THEIARRGIA LVPEGRRIFP RMTVIENLQM GTAHADPANY AADTARVFAM
FPILQERQAQ RAGTLSGGEQ QMLAIGRALM SRPKLLLLDE PSLGLAPIYI RKIFQIVREL
NRDHGMTILL VEQNANQALR VADRGYVLQH GEITLAGTGA ELLASPEVRA AYLEGGHA