| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0519 |
|---|
| Symbol | |
|---|
| ID | 7085133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 584532 |
|---|
| End bp | 585302 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643697547 |
|---|
| Product | LamB/YcsF family protein |
|---|
| Protein accession | YP_002354189 |
|---|
| Protein GI | 217968955 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGA CGATCAACCT CAACGCCGAC CTCGGCGAAT CCTTCGGCCC CTGGACCATG
GGCGAGGACG AGGCCCTTCT GCAGGTGGTG CGCTCGGCCA ACATCGCCTG CGGCTTCCAC
GCCGGCGACC CGGTGGTGAT GCGCCACACC GTGCGCACGG CGCTCGCGGC GGGGGTGAGC
CTCGGCGCCC ACCCGGCCTA CCCCGACCTG CAGGGCTTCG GTCGCCGGCC GATGAAGATG
GCGCCGGCCG AGCTCGAGGC GATGATCATC TACCAGGTCG GCGCGCTCGC CGGCATGGCT
GCGGCCGAAG GCGGCCGCAT CACCCACGTC AAGCCGCACG GCGCACTCAA CAACCAGGCC
TGCGAGGATG CGGCGCTCGC CGACGCGGTC GCGCGCGCGG TCAAGGCCAT CGACCCCGGG
CTGATCCTGC TCGCCCCGGT GCTGTCGGAA CTCCATGCGG CCGGCGCGCG CGCCGGGCTG
AGGGTCGCCG GCGAGGTCTT CGCCGACCGC GCCTACACCG ACAAGGGCAC GCTGGTGCCG
CGCGGCCAGC CCGGCGCGGT CATCCACGAC CACGACGAGC TCGTCACCCA CGTGCTGCGC
ATGCTGGAGG CCGGCGGCGT GGTCAGCCAG AGCGGCAAGG TGCTGCCGAC TTCGATGGAC
AGCATCTGCG TGCACGGCGA CACCCTGGGC GCAGTGGAGA GCGCGCGACA TCTGCGCACG
GAACTCGAAG CGCGCGGCTG GACCATCGCC CCCCTGCCAC AGCTCTCCTG A
|
|---|
| Protein sequence | MNKTINLNAD LGESFGPWTM GEDEALLQVV RSANIACGFH AGDPVVMRHT VRTALAAGVS
LGAHPAYPDL QGFGRRPMKM APAELEAMII YQVGALAGMA AAEGGRITHV KPHGALNNQA
CEDAALADAV ARAVKAIDPG LILLAPVLSE LHAAGARAGL RVAGEVFADR AYTDKGTLVP
RGQPGAVIHD HDELVTHVLR MLEAGGVVSQ SGKVLPTSMD SICVHGDTLG AVESARHLRT
ELEARGWTIA PLPQLS
|
|---|
| |