| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0506 |
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| Symbol | |
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| ID | 7085017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 570308 |
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| End bp | 571786 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643697534 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002354176 |
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| Protein GI | 217968942 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACCC ACGCAAAAGC CCTGCTCGTG CCGGATTCGG TGCCGGTGTC GAGCGCCCGT
CGCGGGCGTG CAGCCACGCC GCTGCGCAGC CTGGTGGTGG CGCTCGCCGC CGCCACGCTA
GGCGCCTGCT CGATGATCCC GGTGTTCGAG CGCCCCGCGG CGCCGGTGCC GGCGACCTTC
CCGCAGGCGA CGCCGACCGC GGCCCCGGTG GTGGCGCCCC TGGCCGACAC CATCGCCTGG
CGCGACTACT TCGCCGATCA GCGCCTGCGC GAGGTGATCG CGCTCGCACT CGAGAACAAC
CGCGACCTGC GCGTCGCCGC GCTCAACATC GAGCGCGCGC GCGCGCAGTA CGGCATCCAG
CAGGCGGACC TGTTCCCGTC GATCGCGGTC AGCGGCGGGC AGAGTGCGCA GCGCGTGCCG
GGCGACCTGA GCATGACGGG TGACTCCAAC GTCAGCCGCC AGTACTCGGC CAACCTCGGC
TTCGCCAGCT ACGAGCTCGA TTTCTTCGGC CGCGTCCGCA GCCTCGAGGA GCAGGCGCTG
CAGAACTACC TCGCGACCGA GGAGGCTCGC CGCAGCGCGC AGATCAGCCT GGTGGCCGAA
GTCGCCAATG CCTGGCTTCG CCTGGCTGCA GACCGCGAAC GCCTGGCGCT GGCGCACAAC
ACCCGGCAGA CCCGCCAGGC GTCGTTCGAT CTCGTGCGGC GCAGCTTGGA GCTGGGGGCA
GTGTCGGCGC TCGACGTGCA TCAGGCCGAG ACCCTGCTGC AGAGCGCGCG TGCCGATGCG
GCACGTTTCG AGACCGTGGT TGCGCAGGAC CGCAACGTGC TCGCGCAACT GGTCGGCGGC
GGTGTCCCGG ACACGCTGTT GCCGGACGGG CTCGAGCAGG CGGTTGCGAC GGTGGCGGAG
CTCCCCGCCG GGGTGCCCTC CGAGGTGCTC ACGCGCCGTC CCGACATCGT GCAGGCCGAA
CGTGCCCTGC TCGCGGCCAA TGCCAGCATC GGCGCTGCGC GTGCAGCCTT CTTCCCGCGC
ATCACGCTGA CCGCCAGCGC CGGCACCGCG AGCAGCACGC TCGATGGCCT GTTCGACGGC
GGCTCGGGGG CGTGGAGTTT CGTGCCGCAG TTGCGCCTGC CGATCTTCGA GGCCGGCCGC
CTCCAGGCCA GCCTGGATCT CGCCGAGATC CAGCGCGACA TCAACGTCGC CCAGTACGAG
AAGGCGATCC AGTCGGCGTT CAGGGAAGTG GCCGACGCCC TCGCCGAGCG CGCGACCGTC
GCCGAGCGCA TCGACGCCCG GCGCAAGCAG GTGGCGGCGA CGCAGAACAG CTTCAAGCTG
TCCGACGCCC GCTACCGCGG TGGCGTCGAC AGCTACCTGA GCCTGCTCGA CGCCCAGCGC
AGCCTCTACG CAGCCGAACT GGAGCTGATC GGCGTGCGCC TCATCGAGGC GACCAACCGC
GTCGAACTCT ACAAGGCGCT CGGCGGCGGC TGGCAGTGA
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| Protein sequence | MKTHAKALLV PDSVPVSSAR RGRAATPLRS LVVALAAATL GACSMIPVFE RPAAPVPATF
PQATPTAAPV VAPLADTIAW RDYFADQRLR EVIALALENN RDLRVAALNI ERARAQYGIQ
QADLFPSIAV SGGQSAQRVP GDLSMTGDSN VSRQYSANLG FASYELDFFG RVRSLEEQAL
QNYLATEEAR RSAQISLVAE VANAWLRLAA DRERLALAHN TRQTRQASFD LVRRSLELGA
VSALDVHQAE TLLQSARADA ARFETVVAQD RNVLAQLVGG GVPDTLLPDG LEQAVATVAE
LPAGVPSEVL TRRPDIVQAE RALLAANASI GAARAAFFPR ITLTASAGTA SSTLDGLFDG
GSGAWSFVPQ LRLPIFEAGR LQASLDLAEI QRDINVAQYE KAIQSAFREV ADALAERATV
AERIDARRKQ VAATQNSFKL SDARYRGGVD SYLSLLDAQR SLYAAELELI GVRLIEATNR
VELYKALGGG WQ
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