Gene Tmz1t_0419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0419 
Symbol 
ID7084930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp478564 
End bp479751 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content66% 
IMG OID643697451 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_002354094 
Protein GI217968860 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTCGA ACAAGGCTAG CTTCAACTGG GAAGACCCGC TGCTGCTCGA CCTGCAGCTG 
ACCGAGACCG AGCGCATGGT GCGCGACACG GCGCGCGCCT ACAGCCAGGA CAAGCTGCTG
CCGCGCGTGC AGGAGGCCTT CCGCCACGAG AAGACCGATG CCGCGATCTT CCGCGAGATG
GGCGAACTCG GTCTGCTCGG CGCCACCATC CCCGAGCAGT ACGGCGGCTC CGGTCTCAAC
TACGTGTGCT ACGGCCTGAT CGCCCGCGAG GTCGAGCGTG TCGACTCCGG CTACCGCTCG
ATGATGAGCG TGCAGAGCTC GCTGGTGATG GTGCCGATCA ACGAATTCGG TACCGAGGCG
CAGAAGCAGA AGTACCTGCC CAAGCTCGCC ACCGGCGAAT GGATCGGCTG CTTCGGCCTC
ACCGAGCCGA ACCACGGCTC CGACCCGGGC TCCATGATCA CCCGTGCGCG CAAGGTCGAT
GGCGGCTTCA GCCTCTCCGG CAGCAAGATG TGGATCACCA ACAGCCCGAT CGCCGACGTG
TTCGTGGTGT GGGCCAAGGA CGACGAAGGC CAGATCCGCG GCTTCATCCT CGAGAAGGGC
TGGAAAGGCC TGTCCGCGCC CGCCATCCAC GGCAAGGTCG GCCTGCGCGC CTCGATCACC
GGCGAGATCG TCATGGACGA GGTCTTCGTG CCGGAAGAGA ACGCCTTCCC GACCGTGCGT
GGGCTCAAGG GCCCCTTCAC CTGCCTCAAC TCGGCGCGCT TCGGCATCGC CTGGGGTGCG
CTCGGCGCCG CCGAGGCCTG CTACGAGACG GCCCGCCAGT ACACGATGGA CCGTAACCAG
TTCGGCCGTC CGCTCGCCGC CAACCAGCTC ATCCAGAAGA AGCTCGCCGA CATGCTGACC
GAGATCACCC TCGGCCTGCA GGCGGTGCTG CGCGTGGGCC GCATGAAGGA CGAGGGCATC
GCCCCGGTCG AGATCACCTC GATCATCAAG CGCAACTCCT GCGGCAAGGC GCTCGACATC
GCCCGCATGG CGCGCGACAT GCTCGGCGGC AACGGCATCT CGGACGAGTA CCCGGTGGCC
CGCCACCTGG TGAACCTCGA GGTGGTCAAC ACCTACGAAG GCACCCACGA CGTCCATGCG
CTGATCCTCG GCCGTGCCAT CACCGGCATC GCCGCGTTCA GCAACTGA
 
Protein sequence
MASNKASFNW EDPLLLDLQL TETERMVRDT ARAYSQDKLL PRVQEAFRHE KTDAAIFREM 
GELGLLGATI PEQYGGSGLN YVCYGLIARE VERVDSGYRS MMSVQSSLVM VPINEFGTEA
QKQKYLPKLA TGEWIGCFGL TEPNHGSDPG SMITRARKVD GGFSLSGSKM WITNSPIADV
FVVWAKDDEG QIRGFILEKG WKGLSAPAIH GKVGLRASIT GEIVMDEVFV PEENAFPTVR
GLKGPFTCLN SARFGIAWGA LGAAEACYET ARQYTMDRNQ FGRPLAANQL IQKKLADMLT
EITLGLQAVL RVGRMKDEGI APVEITSIIK RNSCGKALDI ARMARDMLGG NGISDEYPVA
RHLVNLEVVN TYEGTHDVHA LILGRAITGI AAFSN