Gene Tmz1t_0412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0412 
Symbol 
ID7084923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp473340 
End bp473831 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content69% 
IMG OID643697445 
Producttranscriptional regulator, BadM/Rrf2 family 
Protein accessionYP_002354088 
Protein GI217968854 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATCA CCCAGCACAC CGATTACGCG CTTCGCCTGC TCATGTACCT CGGCACCTGC 
ACCGAGCGAC GCGTGACCAT CAAGGAAGTG GCGGAACGCT TCGACATCTC GCGCAGCCAC
CTGATGAAGG TGGTCACCGG GCTGGTGGCG AAGGGTTTTG TCGACGGCGC GCGCGGCAAG
GGCGGCGGAC TCCGGCTGGC GCGTGCGGCG ACGCAGATCG GTCTCGGCGA CGTGGTCCGC
GGGATGGAGC CCAGCTTCGA GCTGGTCGAG TGCTTCGGAT CGGGATCGCA CTGCCTGCTG
GATCCGGCCT GCCGGCTCAA GGGCGCACTG GCCGGCGCCC TGCAGGCCTT CTTTGCCGCC
CTCGACCGCC TCACGCTCGC CGACCTGATC GGCGACGACG GGCAGCTGCA CGCCGTGCTC
GGCATCCCGC AAGCGGACGC GCAAGCCCCC CGGCCGACGA TCGAGATCAG GCCGGGCACC
CGGGCAGACT GA
 
Protein sequence
MNITQHTDYA LRLLMYLGTC TERRVTIKEV AERFDISRSH LMKVVTGLVA KGFVDGARGK 
GGGLRLARAA TQIGLGDVVR GMEPSFELVE CFGSGSHCLL DPACRLKGAL AGALQAFFAA
LDRLTLADLI GDDGQLHAVL GIPQADAQAP RPTIEIRPGT RAD