Gene Tmz1t_0359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0359 
Symbol 
ID7084865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp407038 
End bp408897 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content67% 
IMG OID643697391 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_002354039 
Protein GI217968805 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGATAC GTGTCGTTGC GGCCCGCCAG GACAGCCTGG CGCGCCAGAT GCTCTGGAGA 
ATCCTGATTG TTGCGAGCGC CGCCTCGGTC GCGTTCGCGA CGGTCTTCGT CGCGCTTTAC
CTCGATCAAC TCAAGGCGAC GCGCGCCGAT GCCTCGCTCA ACCTGAACCG GATGCTCGCG
ACCACCTGGG AAAACGCGAT GCTCAAGCGC GACGTCGAGG GCTTGCGCGA GATCGTCTCC
AGCCTGGGTG CGCTGCGCGA TATCCGTGAC GTCCTGGTAC TCGCCCCCAA TGGTGAAGTG
CGCTTCGCCT CCAACCCGGT CCGGCTCGGA ATGCAGCTCC CCGGGCTCGT GGCCTCGACA
GCGGGCGGAA TGGCCACGAG CCGGTTCGAG CATGGCATCG AGGATGAGGA AGTGCTGCGT
TCGATCAATC CGGTGCCCAA CCGTACAGAG TGCGTGCCGT GCCATGGCCC GGTGTCGTCG
TCGCCGATCA ACGGCGTCCT CGTGATCGAC TACGACGCCA CCCCGGTGCG CCAGCAGGCG
CTTGCGAGCG CCGCCCTGTT CGCGGCTGCG GGCGGGCTGG TCATCGTGCT CACAATCATG
GCGGTATGGT GGTTGTTGCG CAGACGGGTG CTCAACCCGC TTGCGCACCT CGATCGCGCC
GCAGGCGCGC TCGCCGCTGG CGATCTGAGC GCGCGCGTCG AGGTCGCCCA CCTCGACGAG
ATCGGGCGCA GCGCACAGCG CTTCAATACG ATGGCCGACG CGCTCCAGCG CGAACTCGGC
CGCCACGCCG CGCACCGCAA ATATCTGCAG GACCTCATCG ATGGCCTGCC GGACGGGCTG
CGCGTCATCC GCAAGTCCGA CTTCACCGTG GTTAGCGCAA ACCGGGCGTT CGGCGAGCAA
CTCGGCTTGT CCGCGACGGC GGGCCAGCCC TGCTACCTCT CCAGCCATGG TCGCAGCAGC
CCCTGTGTGC CGACGATGGT GCGCTGCCCG GTCGCCGAGC TGCACGAGCA TGGCCAGGTC
CTGAAGTGCC ACCACCGTCA TCGGCGTGCA AGCGGCGAGG AGTTCGCGGT CGAGGTACAC
GCCGGCCTGA TCGATGTCGA TACCGAGCAG GGCCGTGAGC GCTATATCGT CGAATCGGTC
CGCGACCTGA GCCGCGCGGC AAGCATCTCG CAGGAACACA GGATGACCGA GCTCGGTTTG
CTGGCTGCCG GCATCGCGCA CGAGATCCAC AACCCGCTCG GTTCGCTGCG CCTCGGCCTC
GAGGCGATGG AGCGCCGCTT GCGCGGACGC CCCGAGCGCG ACGATCGCAT CGACGACTAC
CTGCGCACGA TGGATGAGGA GATTGACCGC TGCCTGCAGG TCACCCAGCG GCTACTGATG
CTGTCCCGCC CGCCCCAGGC TCGTGTCCAG CCGGTGGATG TCAATCCGGT GCTTGCGGAC
ACCTCCTGCC TGCTCGCCTA CGATGCGGAG AATCGCCAGA TCGAGCACAT CCTTGAGGCC
GACAAGGCGG CACCGCGGGT GTGGGCGGAC GACGCCGACC TGCGGATGCT TATGATCAAC
CTCGTGCAGA ACGCCCACCA TGCGATGCCC TCGGGAGGGC AGGTGACCCT GCGCAGCCAC
ATCATCGGAG ACGAGGTGCT GATCGAGGTG GAGGACACCG GGGTTGGGAT CCCCGAAGAC
GACGTTCCGC ATCTCTTCGA GCCTTTCTTC AGTCGGCGCG CGGATGGCGA ACCGGGAACC
GGGTTGGGGC TCAGCATCTG CCGCAGCATC GTGGACCATT ACGGTGGCCG CATCGCGGTC
GAGAGCCGCC CGGGCGAGGG CGCGCGCTTC AGGGTGTCTC TGCCCCGGGT GCTCGAATGA
 
Protein sequence
MPIRVVAARQ DSLARQMLWR ILIVASAASV AFATVFVALY LDQLKATRAD ASLNLNRMLA 
TTWENAMLKR DVEGLREIVS SLGALRDIRD VLVLAPNGEV RFASNPVRLG MQLPGLVAST
AGGMATSRFE HGIEDEEVLR SINPVPNRTE CVPCHGPVSS SPINGVLVID YDATPVRQQA
LASAALFAAA GGLVIVLTIM AVWWLLRRRV LNPLAHLDRA AGALAAGDLS ARVEVAHLDE
IGRSAQRFNT MADALQRELG RHAAHRKYLQ DLIDGLPDGL RVIRKSDFTV VSANRAFGEQ
LGLSATAGQP CYLSSHGRSS PCVPTMVRCP VAELHEHGQV LKCHHRHRRA SGEEFAVEVH
AGLIDVDTEQ GRERYIVESV RDLSRAASIS QEHRMTELGL LAAGIAHEIH NPLGSLRLGL
EAMERRLRGR PERDDRIDDY LRTMDEEIDR CLQVTQRLLM LSRPPQARVQ PVDVNPVLAD
TSCLLAYDAE NRQIEHILEA DKAAPRVWAD DADLRMLMIN LVQNAHHAMP SGGQVTLRSH
IIGDEVLIEV EDTGVGIPED DVPHLFEPFF SRRADGEPGT GLGLSICRSI VDHYGGRIAV
ESRPGEGARF RVSLPRVLE