| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0333 |
|---|
| Symbol | |
|---|
| ID | 7085634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 378644 |
|---|
| End bp | 379969 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643697370 |
|---|
| Product | transposase IS204/IS1001/IS1096/IS1165 family protein |
|---|
| Protein accession | YP_002354018 |
|---|
| Protein GI | 217968784 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3464] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCTC CGATCGAAGC CCTCTTCACC ACCGCGCTCG GCCTGCAGCC GCCCTGGTAC
GTCGCCAAGG TGGACCTCGA CACCGCGAAG CGGCGGATCG ACTTCGAAGT CGAGCACGCC
GGCAAGCGCG TGCCCTGTCC GGCCTGTGGG GCGGCGCATC AGCCGGTCCA CGATCGAGTG
CGGCGCAGCT GGCGTCACCT GGACTTCTTT CAGTTCGAGG CGTGGCTCCA TGCCGACATC
CCGCGCGTGC AGTGCTCGGG CTGCGGCAAG ACCACGCAGC TGCCGGTGCC GTGGGCTCGC
GAGGGCAGCG GTTTCACGCT GCTGTTCGAG GCGCTGGGCC TGTCCCTGTG CAGCGAGTTG
CCCGTGCGCC AGGCCGCCGC CCAGATGCGC GTCGCGCCCA AGCGGCTGTG GGGGCGGATC
CGCCATTACG TTCACGGTGC ACGCGCTCGG GATGACATGT CGGGCGTGCG CTACGTCGGC
ATCGACGAGA CCAGCGTCAA GCGCGGGCAC GCGTACATCA CCGTGGTGCA TGACCTGGAG
GCCAAGCGCC TGCTGTTCGC CACGCCCGGG CGAGACCACG CGACCCTGCA GGCCTTTGCC
CAGGACCTGC GCGCGCACGG TGGCGAGCCG GAGCGGATCG AGCACGCCTG CATCGACATG
AGCGCGGCCT ACGCCAAGGG GATTGCCCAG GCGCTGCCCA CGGCGCAGGT CAGCTACGAC
CGTTTCCACG TCGTGGCCCT GGCCAATACG GCGATGGACG AGGTTCGCCG CGAGGAGATG
CGCAGCGCCG CAGCCGCGGT CCGCGCGGCG GCCGGTACGG GAAACAAGAA GACGCTGCGC
CAGCTGTTGT GGGCGATGCG CAAGAACCCG CCGCAATGGA CGCCGGCACA GTGCGACGCG
ATGAACTGGC TGCAGCGCTC GGGCCTCAAG AGTGCGCGGG CGTGGCGGAT GAAGCAGGGC
CTGCGGCTCG TCTACCGCGA GGCGGCGGCG AGCAACTGCG AAGAGGTCGC CCGCGGGGCC
TTGATGAAGT GGATCAGTTG GGCCCGACGC TCTCGCCTGG AACCCTTCAA GCGGCTCGGC
GCCACGGTCA AGGCGCATCT GGGCGGCGTG CTCCGCGGCA TGCTCGACGG GCGCAGCAAC
GCCTACGTCG AGGCGATGAA CGGGCAGCTT CAGCAGACGA AGACCGCCGC CCGAGGCTTC
CGCAACCTCG ACAATTTCAT CGCCGTCGCC TACCTGCGCA TGTCCAAGCT CGAGCATCTA
CCGAAGAACC CCATGGTGCC GGCGATCCCC CGCGAATACG GGCGCTACCG TCATGTTTGT
TGTTGA
|
|---|
| Protein sequence | MSSPIEALFT TALGLQPPWY VAKVDLDTAK RRIDFEVEHA GKRVPCPACG AAHQPVHDRV
RRSWRHLDFF QFEAWLHADI PRVQCSGCGK TTQLPVPWAR EGSGFTLLFE ALGLSLCSEL
PVRQAAAQMR VAPKRLWGRI RHYVHGARAR DDMSGVRYVG IDETSVKRGH AYITVVHDLE
AKRLLFATPG RDHATLQAFA QDLRAHGGEP ERIEHACIDM SAAYAKGIAQ ALPTAQVSYD
RFHVVALANT AMDEVRREEM RSAAAAVRAA AGTGNKKTLR QLLWAMRKNP PQWTPAQCDA
MNWLQRSGLK SARAWRMKQG LRLVYREAAA SNCEEVARGA LMKWISWARR SRLEPFKRLG
ATVKAHLGGV LRGMLDGRSN AYVEAMNGQL QQTKTAARGF RNLDNFIAVA YLRMSKLEHL
PKNPMVPAIP REYGRYRHVC C
|
|---|
| |