| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0321 |
|---|
| Symbol | |
|---|
| ID | 7085622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 363926 |
|---|
| End bp | 365086 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643697358 |
|---|
| Product | efflux transporter, RND family, MFP subunit |
|---|
| Protein accession | YP_002354006 |
|---|
| Protein GI | 217968772 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGCT TGACTACCTA TGCGCTCGAC CTCCATAGAC CCGTGCCGTC GGTCCGGGAG
ACTGGCACTT TGAGCACGGG CAGGAGCGTG CAGGCGTGCA CGGTGGCCGT GCTGTCCATG
TGTGTACTTC TGCTCGCTGC CTGCACTGAT GGCTCAATCT CGTCTAGATC CGTGGCCACG
CCGGTGGCTG CAGAAGTCGC TGTGGTACGG CAGGCACGAT TACCTGTTAC CAACGATGTG
ACTGGCAGCG TCGTCTCTGA CGGACGCATC GACGTAGCTT CGCGCGTGAC CGGATTCATT
CGCCAGCTCG ATGTTCGCGA GGGCCAGGCG GTCAGGCGCG GCGACCTGCT GTTGCGCATC
GACGCCTCTG ACATCGACGC GGCTATCGCG CAGGCACGCG CCGGCGTGCA GGCCGCCCAG
GAGGCTTGGC GGGATGCGCA GTACGACGTG AACCAGAATG CGCAACTGGT GCCGGCTGGC
GCGATCTCGG CCGACGCGCT GCGCAAGTCC AGGGTGCGGG AGGAAACCAC CCGCGCGACG
CTGGAGCAAG CGCAATCGGC GCTGGCGGCG GCACAAGCGC AGCGCAACTA CGTGGCCATC
ACCAGTCCGG TGGATGGCGT GGTCGTCTCG GTGGCCCGGC GCAGCGGTGA GATGGCCACT
CCCGGCGCGC CGCTGATGAC GGTGGAGTCG CGTGAGGTCT TGCTGTTCAA GGCGTTCGTA
CCTGAGCGCA GCCTGGCGGC AATCAAGTCC GGTGACTTGA TTCCCGTGCG CATCGACGCG
CTGGGCGATG AGCGCTTCAA GGGACGGGTC CGGGGCGTGG TGCCATCGGG CGATGGCGTG
ACCCGCCGCT ACGAGGTGGA CATCGTGCTG CCGCGGGACG CGCGCCTGCT GCCGGGAATG
TTCGGCCGTC TCGAAATCCT GCTGGACGAG AAGCGGGCCG TCACGGTGCC GCGTACGGCC
CTCGTGCGGC GCGGCGGTTT GGACGGCGTG TTCGTGCTGC AGGAAGGTGT GGCGCGTTTT
CGCTGGCTGC GCACAGGCCA GCGCCTGGGC GATGTGGTGG AGGTGACCGC GGGCCTGTCG
GACGGAGAAA CCATCCTCGC CAGCGTCGCC GACACCGTCC ATGACGGCAT GCCGATCCAG
GCCGTCGGGG GCGCGCGATG A
|
|---|
| Protein sequence | MNRLTTYALD LHRPVPSVRE TGTLSTGRSV QACTVAVLSM CVLLLAACTD GSISSRSVAT
PVAAEVAVVR QARLPVTNDV TGSVVSDGRI DVASRVTGFI RQLDVREGQA VRRGDLLLRI
DASDIDAAIA QARAGVQAAQ EAWRDAQYDV NQNAQLVPAG AISADALRKS RVREETTRAT
LEQAQSALAA AQAQRNYVAI TSPVDGVVVS VARRSGEMAT PGAPLMTVES REVLLFKAFV
PERSLAAIKS GDLIPVRIDA LGDERFKGRV RGVVPSGDGV TRRYEVDIVL PRDARLLPGM
FGRLEILLDE KRAVTVPRTA LVRRGGLDGV FVLQEGVARF RWLRTGQRLG DVVEVTAGLS
DGETILASVA DTVHDGMPIQ AVGGAR
|
|---|
| |