Gene Tmz1t_0232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0232 
SymbolgatB 
ID7084353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp266539 
End bp267999 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content68% 
IMG OID643697274 
Productaspartyl/glutamyl-tRNA amidotransferase subunit B 
Protein accessionYP_002353923 
Protein GI217968689 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) 
TIGRFAM ID[TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.957077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGAT CCGATTGGGA AGTCGTCATC GGGCTGGAAG TCCACGCCCA GCTCGACACC 
GCCAGCAAGA TCTTTTCCGG CGCCAGCACC GCCTTCGGCG CCGAGCCCAA CCGCCAGGCG
AGCGCGGTGG ACATCGCGCT CCCCGGCGTG CTGCCGGTGC TCAACCGCGG CGCGGTCGAG
CGCGCGATCC GCTTCGGGCT GGCGATCGGC GCCCACGTGG CGGAAAAGAG CGTGTTCGCG
CGCAAGAACT ACTTCTACCC CGACCTCCCC AAGGGCTACC AGATCAGCCA GATGGACCTG
CCGGTGGTAG TCGGCGGCAC GATCACCATC CGCGTCGGCG AGGGCGAGTC GGCGTATGAG
AAGACCGTGC GCCTGACCCG CGCCCACCTC GAGGAAGACG CGGGCAAGAG CCTGCACGAG
GACTTCCACG GCATGACCGG CATCGACCTC AACCGCGCCG GCACGCCGCT GCTCGAGATC
GTCTCCGAGC CCGACATGCG CTCGTCCGCC GAGGCCGTGG CCTATGCGCG CACGCTGCAC
GCGCTGGTGC GCTGGATCGA CATCTGCGAC GGCAACATGC AGGAAGGCTC GTTCCGCTGC
GACGCCAACG TCTCGGTGCG CAGGAAGGGC GCGACCGAGT TCGGCACCCG GCGCGAGATC
AAGAACCTCA ACTCCTTCCG CTTCCTGCAG CAGGCGATCG ACTACGAGGT GCAGTGGCAG
ATCGACACCC TCGAGGACGG CGGCCGCATC GAGCAGGCCA CCGTGCTGTT CGACCCGGAC
ACGGGCGAGA CGCGCATGAT GCGCAGCAAG GAAGACGCCC ACGACTACCG CTACTTCCCC
GACCCCGACC TGCTGCCGCT GATGATCGCG CCGGAGTGGA AGGCGCGCGT GCAGGCGGAG
ATGCCTGAGC TGCCGGGGGC GATGAAGGGG CGCTTCATGG ACGACTGGGG GCTGTCGGCC
TACGACGCGA CCACGCTCAC CGCCTCCAAG GAAGTCGCCG ACTTCTACCA GGCCACGGTG
TCGGCGGCCG GGGCCGCGCT CGCCAAGCCT TGCGCCAACT GGGTCATGGG CGAACTCGCC
GCCCGCCTCA ACAAGGCCGA GCTCGACGTC GCCGCCTCGC CGGTGTCGCC GGCGCAGCTC
GCCGGCCTGG TGGCGCGCAT CGCCGACAAC ACCATCTCCA ACGCCATCGC CAGGAAGGTG
TTCGAAGCGC TGTGGAACGG CGAGGGTGCG ACGGCGGACG AAGTCATCGA CAAGCAAGGC
CTCAGGCAGG TGACGGACAC CGGCGCGATC GAGGCCATGA TCGACGAGGT GCTGGCGGCC
AACCAGAAAT CGGTGGAGGA ATTCCGCGCC GGCAAGGAGA AGGCCTTCAA CGCCCTGGTC
GGCCAGGTCA TGAAGGCGAG CAAGGGCAAG GCCGGCCCTG CCCAGGTCAA CGCGCTGCTG
AGGAAGAAGC TCGGCGCCTG A
 
Protein sequence
MSRSDWEVVI GLEVHAQLDT ASKIFSGAST AFGAEPNRQA SAVDIALPGV LPVLNRGAVE 
RAIRFGLAIG AHVAEKSVFA RKNYFYPDLP KGYQISQMDL PVVVGGTITI RVGEGESAYE
KTVRLTRAHL EEDAGKSLHE DFHGMTGIDL NRAGTPLLEI VSEPDMRSSA EAVAYARTLH
ALVRWIDICD GNMQEGSFRC DANVSVRRKG ATEFGTRREI KNLNSFRFLQ QAIDYEVQWQ
IDTLEDGGRI EQATVLFDPD TGETRMMRSK EDAHDYRYFP DPDLLPLMIA PEWKARVQAE
MPELPGAMKG RFMDDWGLSA YDATTLTASK EVADFYQATV SAAGAALAKP CANWVMGELA
ARLNKAELDV AASPVSPAQL AGLVARIADN TISNAIARKV FEALWNGEGA TADEVIDKQG
LRQVTDTGAI EAMIDEVLAA NQKSVEEFRA GKEKAFNALV GQVMKASKGK AGPAQVNALL
RKKLGA