Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_0232 |
Symbol | gatB |
ID | 7084353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 266539 |
End bp | 267999 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643697274 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
Protein accession | YP_002353923 |
Protein GI | 217968689 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.957077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCGAT CCGATTGGGA AGTCGTCATC GGGCTGGAAG TCCACGCCCA GCTCGACACC GCCAGCAAGA TCTTTTCCGG CGCCAGCACC GCCTTCGGCG CCGAGCCCAA CCGCCAGGCG AGCGCGGTGG ACATCGCGCT CCCCGGCGTG CTGCCGGTGC TCAACCGCGG CGCGGTCGAG CGCGCGATCC GCTTCGGGCT GGCGATCGGC GCCCACGTGG CGGAAAAGAG CGTGTTCGCG CGCAAGAACT ACTTCTACCC CGACCTCCCC AAGGGCTACC AGATCAGCCA GATGGACCTG CCGGTGGTAG TCGGCGGCAC GATCACCATC CGCGTCGGCG AGGGCGAGTC GGCGTATGAG AAGACCGTGC GCCTGACCCG CGCCCACCTC GAGGAAGACG CGGGCAAGAG CCTGCACGAG GACTTCCACG GCATGACCGG CATCGACCTC AACCGCGCCG GCACGCCGCT GCTCGAGATC GTCTCCGAGC CCGACATGCG CTCGTCCGCC GAGGCCGTGG CCTATGCGCG CACGCTGCAC GCGCTGGTGC GCTGGATCGA CATCTGCGAC GGCAACATGC AGGAAGGCTC GTTCCGCTGC GACGCCAACG TCTCGGTGCG CAGGAAGGGC GCGACCGAGT TCGGCACCCG GCGCGAGATC AAGAACCTCA ACTCCTTCCG CTTCCTGCAG CAGGCGATCG ACTACGAGGT GCAGTGGCAG ATCGACACCC TCGAGGACGG CGGCCGCATC GAGCAGGCCA CCGTGCTGTT CGACCCGGAC ACGGGCGAGA CGCGCATGAT GCGCAGCAAG GAAGACGCCC ACGACTACCG CTACTTCCCC GACCCCGACC TGCTGCCGCT GATGATCGCG CCGGAGTGGA AGGCGCGCGT GCAGGCGGAG ATGCCTGAGC TGCCGGGGGC GATGAAGGGG CGCTTCATGG ACGACTGGGG GCTGTCGGCC TACGACGCGA CCACGCTCAC CGCCTCCAAG GAAGTCGCCG ACTTCTACCA GGCCACGGTG TCGGCGGCCG GGGCCGCGCT CGCCAAGCCT TGCGCCAACT GGGTCATGGG CGAACTCGCC GCCCGCCTCA ACAAGGCCGA GCTCGACGTC GCCGCCTCGC CGGTGTCGCC GGCGCAGCTC GCCGGCCTGG TGGCGCGCAT CGCCGACAAC ACCATCTCCA ACGCCATCGC CAGGAAGGTG TTCGAAGCGC TGTGGAACGG CGAGGGTGCG ACGGCGGACG AAGTCATCGA CAAGCAAGGC CTCAGGCAGG TGACGGACAC CGGCGCGATC GAGGCCATGA TCGACGAGGT GCTGGCGGCC AACCAGAAAT CGGTGGAGGA ATTCCGCGCC GGCAAGGAGA AGGCCTTCAA CGCCCTGGTC GGCCAGGTCA TGAAGGCGAG CAAGGGCAAG GCCGGCCCTG CCCAGGTCAA CGCGCTGCTG AGGAAGAAGC TCGGCGCCTG A
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Protein sequence | MSRSDWEVVI GLEVHAQLDT ASKIFSGAST AFGAEPNRQA SAVDIALPGV LPVLNRGAVE RAIRFGLAIG AHVAEKSVFA RKNYFYPDLP KGYQISQMDL PVVVGGTITI RVGEGESAYE KTVRLTRAHL EEDAGKSLHE DFHGMTGIDL NRAGTPLLEI VSEPDMRSSA EAVAYARTLH ALVRWIDICD GNMQEGSFRC DANVSVRRKG ATEFGTRREI KNLNSFRFLQ QAIDYEVQWQ IDTLEDGGRI EQATVLFDPD TGETRMMRSK EDAHDYRYFP DPDLLPLMIA PEWKARVQAE MPELPGAMKG RFMDDWGLSA YDATTLTASK EVADFYQATV SAAGAALAKP CANWVMGELA ARLNKAELDV AASPVSPAQL AGLVARIADN TISNAIARKV FEALWNGEGA TADEVIDKQG LRQVTDTGAI EAMIDEVLAA NQKSVEEFRA GKEKAFNALV GQVMKASKGK AGPAQVNALL RKKLGA
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