| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0198 |
|---|
| Symbol | |
|---|
| ID | 7084319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 231830 |
|---|
| End bp | 232477 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643697240 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
|---|
| Protein accession | YP_002353889 |
|---|
| Protein GI | 217968655 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCT ATGTGATGAG CATCGACCTG CGCCGCTGCG TGGGCTGCCA GACCTGTACC
GCGGCGTGCA AGAACGCCAA CGCCACCCCG CCCGGCGTGC AGTGGCGCCG CGTGCTCGAC
CTCGAGACCG GCGAGTTCCC CGACGTGCGC CGCAGCTTCC TGCCGACGGC CTGCATGCAC
TGCGCCGAGC CGCCGTGCGC GGCGGTCTGC CCCACCGAGG CGACGCAGAA GCGCCGCGAC
GGCCTGGTCA CCATCGACTA CGACGTGTGC ATCGGCTGCG CCAACTGCGT GATGGCCTGT
CCCTACGAGG CGCGCTCGAT CGTGCACGAA GCGCGCTTCG CCTACGGCGA GCAGCCGATC
GCCTCCGAGG CGATCCGCTT CGACCCGTCG CGCATCTCGG TGGCGACCAA GTGTTCTTTC
TGCAAGGAAC GCATCGACGC CGCCGCGGCG AGCGGACGCA TCCCCGGGCG CGACCCCGAG
GTCACCCCGG CCTGCGTCAA CTCCTGCATC TCGGGCGCGA TGGTCTTCGG CGACATCGAC
GACCCCGACA GCGCGGTCAG CCGCCTGCTC GCAAAAACCC AGCACTTCCA CATGCACGAG
GAGCTCGGCA CCGGGCCGAG CGTCTATTAC ATCTGGGATC ACGCCTGA
|
|---|
| Protein sequence | MTRYVMSIDL RRCVGCQTCT AACKNANATP PGVQWRRVLD LETGEFPDVR RSFLPTACMH
CAEPPCAAVC PTEATQKRRD GLVTIDYDVC IGCANCVMAC PYEARSIVHE ARFAYGEQPI
ASEAIRFDPS RISVATKCSF CKERIDAAAA SGRIPGRDPE VTPACVNSCI SGAMVFGDID
DPDSAVSRLL AKTQHFHMHE ELGTGPSVYY IWDHA
|
|---|
| |