Gene Tmz1t_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0106 
Symbol 
ID7085204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp122802 
End bp124424 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content71% 
IMG OID643697153 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_002353802 
Protein GI217968568 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGAT TTTCCGACAC CCCGATATGG CTGCGTCTCA CCGGCGCGAT CTGGCTGATG 
ATGGTGGCCG CGTTCGGCAG CATGATCGTC TGGGAAACCC GGGTGAACCG CGACATGGCG
ATCGAGCAGG CGAAGGACTT CGCCGGCACG GTCAATGAGA TGACGATGGC CGGACTCACC
GGCATGATGA TCACCGGCAC GGTGGCGCAG CGCGACGTCT TCCTCGACCA GATCAAGGAG
CTCAGCGTGG TGCAGGACCT CGAGGTGATC CGCGGCGAGG CGGTGAGCCG GGTGTTCGGG
GCGGGCGGTG CGCGCGACGC GGCGCGCGAC GCCGACGAGC GCCTGGCCCT GGTCGAGGGC
CGCGCCACGA TGCGGGTCGA CCACGACGCC GAGCATGGCG AGCATCTGCG CGTGGTGATT
CCCTCGCTGG CCTCGCCCGC CTGGCTCGGC AAGGACTGCA TCGCCTGCCA TCAGGTGCCA
CAGGGCACGC CGCTCGGCGC GGTGTCGATG CGCATCTCGC TCGACAAGGC GAATGCCGCG
GTGAATGCGT TCCGCAACCA GAGCGCGATG TTCGCCGCGC TGGTGTCGAT CCCGCTGATC
CTGTTCATCT ACCTCTTCAT CACCCGCTTC GTCACCCGTC CGCTCGACGG CCTCAACCGG
GGCCTGGGGC GGATCGCCGA GGGTGGCGGC GACCTGCGCC TGCAACTGCC GGTGCGCGGC
CGCGACGAGA TCGGCCGCAG CGCGCGCACC TTCAACGACA TGATGGGCAC GCTCGGCGGG
CTGGTGCGCC AGGTCGGCGA CTCGGCGAGC GCGGTGACCG AGGCGGCGAG CCGGCTGGCC
GCCGACGCCG AGGCGGTCGC CGCGAGCTCG CAGCGCCAGA ACGAGAGCTC GGTGGGCGCG
GCCGACGCGG TGGACGAGAT GGTCGGCAGC ATCTCCGCGA TCGCCGAGCA CGCCGAGGCG
GTGCGCGAGC GCTCGCACGA CAGCCTGGAA CGCTCGCGCG AGGGCCAGCG CAGCCTGGAG
CGTCTGGTCG GCGAGGTCGG CGAGGTCGAG GCCGCGGTGC GCCAGATGGC CGACGCGGTG
GTCGCCTTCG TCGACTCCAC CCAGGCGATC TCGCGCATGA CCAGCGAGGT GCGCGAGATC
GCCGAGCAGA CCAACCTGCT CGCGCTCAAC GCTGCGATCG AGGCCGCGCG CGCCGGCGAG
CAGGGCCGCG GCTTCGCGGT GGTGGCCGAC GAGGTGCGCA AGCTGGCGGA GAAATCCGCG
CGCTCGGCGG GCGAGATCGA CCAGATCACC CGCGAGGTGG CCCGGCGTTC GAGCTCGGTG
CGCGGCGCGC TCGACGACGG CCTCGGTCAC CTCGCCTCCA GCCGGCAGAT GGCCGACGCG
GTGATGCAGG TGCTGACCGC GGCGAATTCG CTCGTGGTCG AGGTGGGCGA AGGCCTCGAC
CGCATCGCCG GCGCCACGGG TGCGCAGCGC AGTGCGAGCG AGTCGGTCAC CGCGCGCATC
GGCGAGATCG CCGGCATGGC GCGCAGCAAC AACGACGCGC TCGCCCACAC CGTGCGTTCG
GCGCGCGAGC TCGGCGAACT CGCCCTGCGC CTGCAGGAAT CCGTGTCGCG CTTCCGTTTC
TGA
 
Protein sequence
MIRFSDTPIW LRLTGAIWLM MVAAFGSMIV WETRVNRDMA IEQAKDFAGT VNEMTMAGLT 
GMMITGTVAQ RDVFLDQIKE LSVVQDLEVI RGEAVSRVFG AGGARDAARD ADERLALVEG
RATMRVDHDA EHGEHLRVVI PSLASPAWLG KDCIACHQVP QGTPLGAVSM RISLDKANAA
VNAFRNQSAM FAALVSIPLI LFIYLFITRF VTRPLDGLNR GLGRIAEGGG DLRLQLPVRG
RDEIGRSART FNDMMGTLGG LVRQVGDSAS AVTEAASRLA ADAEAVAASS QRQNESSVGA
ADAVDEMVGS ISAIAEHAEA VRERSHDSLE RSREGQRSLE RLVGEVGEVE AAVRQMADAV
VAFVDSTQAI SRMTSEVREI AEQTNLLALN AAIEAARAGE QGRGFAVVAD EVRKLAEKSA
RSAGEIDQIT REVARRSSSV RGALDDGLGH LASSRQMADA VMQVLTAANS LVVEVGEGLD
RIAGATGAQR SASESVTARI GEIAGMARSN NDALAHTVRS ARELGELALR LQESVSRFRF