| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0006 |
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| Symbol | |
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| ID | 7085104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 8404 |
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| End bp | 11610 |
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| Gene Length | 3207 bp |
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| Protein Length | 1068 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643697056 |
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| Product | type I site-specific deoxyribonuclease, HsdR family |
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| Protein accession | YP_002353705 |
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| Protein GI | 237653093 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCG TTCTCACCGC CAAGGAAGTG ACTGCCGGTT ACGGCGAACT CGTTCTCGTC
GAGTTGCCCG CGATGGACTG TTTTGCTTCC CTGGGGTGGG AGGTCGCCAA CCTCTACGAC
GAAACCTTCG GCGTCGACGG CACGGAAGGG CGCAAGTCCT CCGCCGAGGT CATCCTGGTG
CCGCGCTTGC GGCGGGCGCT GGAGCGCATC AATCCCGGCT ACCCAGCCAC CGCCTACGAG
CAGGCCATCG AGCAGCTCAC CGAGGACCGC TCCAAGCAGA TCCCGGTGAA CGCCAACCAG
GCTTTCTACA CGCTGCTGCG CGACCGGGTG AAGGTGGAAA TCACCGACGA CGAGGGCAAC
CCGCAGACGG TCGAGCTGTT GGTCATTGAC TGGAACGACC CGGACAACAA CGACTTCTTC
CTCGCCCAGC AGATGTGGGT GTCGGGCGAG ATGTACAAGC GCCGCTGCGA CCTGCTCGGC
TTCGTCAATG GCATCCCGCT GGTCTTCGTC GAGCTGAAGG GGCCGCATGT GCCGCTGAAG
TCGGCCTATG ACGACAACCT GAAGGACTAC AAGGGCCAGA GCGTCCCGCA ACTGTTCCAC
CCCAACGCCT TCATCATCCT GTCGAACGGC TCGCAGACCC GCGTCGGCAC GCTGACCAGT
CCGTGGGAAC ACTTCTTCGA GTGGCGGCGG ATCGATGACG AGACCGAGGC GGGCTCGACC
TCGCTGGAGA CCGCGATCCG GGGGCTGTGC GACAAGCGGC GGCTGCTCGA CCTCGTCGAG
AACTTCACCG TGTTCGAGAC GGCGCGAGGC GGGCTGATCA AGAAGGTGGC CAAGAACCAC
CAGTACCTCG GGGTGAACAA GGCCATCGCG CAGATGGTGA AGCTGCGGGA GTCCGGCGAC
CGCGAGGCGG CGAAGAAGCT CGGCGTCTTC TGGCACACGC AGGGCAGCGG CAAGAGCCTG
TCGATGGTGT TCTTCACTCA GAAGGTGCTG AGGAAGCTCC CCGGCAAGTG GACCTTCGTG
ATGGTCACCG ACCGGGCTGA ACTCGACGAC CAGATCTACA AGACCTTCAC CGCCACCGGG
GCGATCACCG GGGCCGAGGT GCAGGCCAGC AGCGCCGAGA ACCTCAAGCA ACTGCTGCGC
GAGGACCACC GCTACGTCTT CAGCCTGATC CAGAAATTCC GCACGGAGAA GGGCGAGGCC
TACCCGAGGA TTTCTGAGCG GGACGACATC ATCGTCATCA CCGACGAGGC GCACCGCAGC
CAGTACGACG TGTTCGCGCT GAACATGCGT AACGCCCTGC CCAATGCCGC CTTCCTCGGC
TTCACCGGCA CCCCGCTGAT CGCAGGCGAA GAAGAGCGCA CCCGCGAGGT GTTCGGCGAT
TACGTGTCGG TGTACGACTT CGCCCGCTCC ATCGAGGACG GGGCGACGGT GCCCCTGTAC
TACGAGAATC GCACCCCCGA GCTGCAGATC ATCAACGACA ACCTGAACCG CGACATCGAG
CGCCTGCTGG AAGAGGCGGA GCTCTACGAG GAGCAGGAGA AGAAGCTGGA GCGGGAGTTC
GCCCGCGAAT ACCACCTGAT CACCCGCGAC GACCGCCTGG AGACCATCGC CGCCGATCTG
GTGAAGCACT TCCTCGGTCG CGGCTACCGG GGCAAGGCCA TGATGGTCTG CATCGACAAG
GCCACGGCGG TGCGGATGTA CGACAAGGTC CAGACGCACT GGAAGAAGCA TCTGGCCGAC
CTGGAAGCGC AACTGAAGAC CGCCAGCGGG GATGCGAAGG AGACGCTCGC CGACAAGATC
ATGGTCATGC GGACCACCGA CATGGCCGTG GTGGTGTCGC AGTCGCAGAA CGAGATCGAG
GAGCTGAAGG AAAAGGGCCT CGACATCGTC CCGCACCGCC AGCGCATGGT CGGCGAGAAC
CTCGACGAGC AGTTCAAGGA TCCCGATGGC CAACTGCGGC TGGTCTTCGT CTGCGCGATG
TGGATCACCG GCTTCGACGT GCCGACCTGC TCCACGCTCT ACCTCGACAA ACCGATGCGC
AACCACACCC TGATGCAGAC CATCGCCAGG GCGAACCGCG TCGCACCGGG CAAGACCGCC
GGCCTCATCG TCGATTACGT GGGCATCTTC CGTAACCTCC AGGACGCCCT GCGCATCTAC
GCCAAGCCCA ACCAGCCGGG GCAACTGCCG ATCAAGGACA AGGCGGCGCT GGTCGAGCAA
CTGGAAGGGC TGCTGCGGGA CGCGCAATCG TTCTGCACGG GCCTCGGGAT CGACCTGAAG
GGGATCGTGA ACACCCCGCC CGCGCAGCGC CTGGAAGCCC TCCAGAAGGC CATGGACGTG
ATCCTCGAAG CCGGCGAGGA CAAGACCAAG GCCTACCTGC TGCTCGCCGG TCAGGTCGCC
CGGACCTTCA AGGCCATCCT CCCCGACGCG GAAGCCAACG CCCATGCGCC GACCTCGGTG
CTGGTCGCCT ATCTCGGGGC GATGATCAAG GCGCTGCGTC CGCCACCCGA CATCTCCGGG
GTGATGAACG ACCTGGATGC GCTGCTCGAC GACTCCATCG CCACCGAGGG CTATCGCATC
GGGGCGCGAC CGGAAGCCGA GGCCCTGATC GACCTGTCGC AGATCGACTT CGCCGCCCTC
CAGAAGAAGT TCGAGGAAGG CAAGAAGGCC ACCGAGACCG AGAAGCTGAA GGGCCAGATC
GAGAAGAAGC TCGACACGAT GGTCCGCGAG AACAAGGGCC GGATCGACTT CCTGGAGAAG
TTCCAGAGGC TGATCGAGTC CTACAACTCA TCCAGTCACA ACCTGGAGGC CTTCTTCAAG
GAGCTGATGC ACTTCGCCCA GAACCTCACC CAGGAGGAAC AGCGGGCCAC CCGCGAGAAC
CTGAGCGAGG AAGAGCTGGC CATCTTCGAT CTCCTGACAC AACCCGAGCC CGAGCTGACC
GAGAAGGAAA AGAACGAGGT GAAGAAGGTG GCGAAGGACA TGCTCGCCAA ACTGAAGGCC
GAGAAGCTGG TGCTGGACTG GAAGCTGAAG ACCCAGACCA AGGCGGATGT CGAGCGGACG
ATCCGGGACT TTTACATCAG GCTGCCCGGG GCTTACACGC CGGAGCTGAA AAAAGATAAA
CGAGCCAAGA CGTACGCCCA CATCTTCGAG AACTATTTCG GGGCAGGGCA GAGCGTGTAT
CAGGATATTG GTGTTGCGGC GCATTAG
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| Protein sequence | MTTVLTAKEV TAGYGELVLV ELPAMDCFAS LGWEVANLYD ETFGVDGTEG RKSSAEVILV
PRLRRALERI NPGYPATAYE QAIEQLTEDR SKQIPVNANQ AFYTLLRDRV KVEITDDEGN
PQTVELLVID WNDPDNNDFF LAQQMWVSGE MYKRRCDLLG FVNGIPLVFV ELKGPHVPLK
SAYDDNLKDY KGQSVPQLFH PNAFIILSNG SQTRVGTLTS PWEHFFEWRR IDDETEAGST
SLETAIRGLC DKRRLLDLVE NFTVFETARG GLIKKVAKNH QYLGVNKAIA QMVKLRESGD
REAAKKLGVF WHTQGSGKSL SMVFFTQKVL RKLPGKWTFV MVTDRAELDD QIYKTFTATG
AITGAEVQAS SAENLKQLLR EDHRYVFSLI QKFRTEKGEA YPRISERDDI IVITDEAHRS
QYDVFALNMR NALPNAAFLG FTGTPLIAGE EERTREVFGD YVSVYDFARS IEDGATVPLY
YENRTPELQI INDNLNRDIE RLLEEAELYE EQEKKLEREF AREYHLITRD DRLETIAADL
VKHFLGRGYR GKAMMVCIDK ATAVRMYDKV QTHWKKHLAD LEAQLKTASG DAKETLADKI
MVMRTTDMAV VVSQSQNEIE ELKEKGLDIV PHRQRMVGEN LDEQFKDPDG QLRLVFVCAM
WITGFDVPTC STLYLDKPMR NHTLMQTIAR ANRVAPGKTA GLIVDYVGIF RNLQDALRIY
AKPNQPGQLP IKDKAALVEQ LEGLLRDAQS FCTGLGIDLK GIVNTPPAQR LEALQKAMDV
ILEAGEDKTK AYLLLAGQVA RTFKAILPDA EANAHAPTSV LVAYLGAMIK ALRPPPDISG
VMNDLDALLD DSIATEGYRI GARPEAEALI DLSQIDFAAL QKKFEEGKKA TETEKLKGQI
EKKLDTMVRE NKGRIDFLEK FQRLIESYNS SSHNLEAFFK ELMHFAQNLT QEEQRATREN
LSEEELAIFD LLTQPEPELT EKEKNEVKKV AKDMLAKLKA EKLVLDWKLK TQTKADVERT
IRDFYIRLPG AYTPELKKDK RAKTYAHIFE NYFGAGQSVY QDIGVAAH
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