Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtur_1547 |
Symbol | |
ID | 7081982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dictyoglomus turgidum DSM 6724 |
Kingdom | Bacteria |
Replicon accession | NC_011661 |
Strand | - |
Start bp | 1558163 |
End bp | 1560070 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643458656 |
Product | DNA gyrase, B subunit |
Protein accession | YP_002353435 |
Protein GI | 217967929 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00189026 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGGTAA CAAAGAAAGA TAAATACACA GCAGACAGTA TTCAGATATT GGAAGGAACA GAAGCTGTTA GAAGAAGACC TGGCATGTAT ATAGGAGATA CAGGGATAAG AGGATTACAC CACCTCATCT TTGAATTAGT AGATAATAGT ATCGACGAGG TTATGGCAGG ATATTGTAAT TATATACTAG TGGAACTCAA GAAAGATGGG TCAGTAGTAG TCGCAGATAA TGGGAGAGGA ATTCCTGTGG ATATACATCC TCAAGCCAAA AAACCAGCTC TTGAGGTTGT TCTTACTACT CTTCATGCAG GAGGAAAATT TTCTAACTCC ATATATAAAA TAAGTGGTGG ACTTCATGGA GTTGGACTTT CAGTGGTTAA TGCCTTGTCA TCAAAACTTG AAGTTGAGGT TATGAGGGAT GGAAAAATTT TTTATCAGGG CTATGAGAAA GGAAAACCAG TAATGCCTCT TACGGTTAGA GGGGAAACAG ATGAAACTGG TACAAAGATA AGGTTTTATC CTGATTCGGA GATTTTTGAA ACTACAAAAT TTGATTATGA TATTGTGGCA AATAGATTAA GGGAGCTTGC TTTTTTAAAT CCCAATGTAA CCATTGAGCT GAGAGATGAA CGAACTGGAA AATCTAACGT TTTCAAGTAT GAGGGGGGAC TTCTTGAATT TATTGAGTAT CTCTCCAAAG GTAAAGAGAT TCTTCATGAA CCTATTTATA TGAGAAGGGA AGAAGAAAAT TTAATTGTAG AAATTGTAAT GCAATATAAC TCAGGATATG ATGAGCTAAT TTTATCCTAT GCAAATAATA TTCATACTAT TGAGGGTGGA ACCCATGTTA CAGGTTTTAG AACTGCCCTG ACAAGAGTGG TTAATAACTT TGCAAGAAAT TGGGGTTTAT GGAAAGAAAA CGAAAGTCTT TCAGGGGATG ATGTACGTGA GGGGCTTACC GCTATAGTTA GCGTAAAAGT TCCCGACCCT CAATTTGAAG GACAAACCAA AACAAAACTT GGAAATACAG AAGTAAGGAA ATTTGTAGAA AAGGTTGTGG AGGAAGAACT AACAGAGTAT TTTTCTGAGA ATCCCGAGGT AGGAAAACTT ATAATAAGTA AGATTATTGA GGCTTATAGG GCAAGACAAG CAGCAAGAAA GGCAAGAGAG CTTGTAAGAA GAAAGAGTCT CTTAGAATCA AGCTTGCTTC CAGGAAAGCT TGCGGATTGT TCTGAAAGAG ATCCAGAAAA ATGTGAGCTT TTTATTGTTG AGGGAGAGTC TGCAGGCGGT TCTGCAAAGC AGGCAAGAGA CAGGAGATAC CAGGCTATTT TGCCTTTAAG GGGTAAAATA TTAAATGTAG AGAAGGCTCA ACATCTCACT AAAATACTTT CAAGCGAGGA AATTAAGGCA ATAATTGCAT CCTTAGGAAC AGGAATAGGT CAGGATTTTG ATTTATCAAA GTTAAGATAT CATAAAATCA TAATTATGAC CGATGCTGAT GTGGATGGAG CTCATATAAG AACTCTACTT TTGACCTTCT TTTATAGACA TTTTAGACCT CTTATTGAAG GTGGCTATAT TTATATAGCT CAACCACCGC TGTATCTCCT AAAAAAGGGT AAAGAAGAAA GATATGCTTA TTCTGAGGAG GAAAAAGAGG AGATTCTTAG GGAGTGGGGG TACCCAGATA ATGTTTATAT ACAACGATAT AAAGGACTTG GAGAAATGGA TCCAGAGCAA CTTAGAGAAA CCACTATGGA TCCCCAAAAG AGAATTTTAC TTCAGGTTAC TATAGAAGAT GCCTTAGAGG CGGAGAGATT ATTTTCTATT TTAATGGGAA ATAATGTAGA GGAAAGAAGA AGTTTTATAG AGCAAAAAGC GAAATTTGTG AGAAATTTAG ATATTTAG
|
Protein sequence | MAVTKKDKYT ADSIQILEGT EAVRRRPGMY IGDTGIRGLH HLIFELVDNS IDEVMAGYCN YILVELKKDG SVVVADNGRG IPVDIHPQAK KPALEVVLTT LHAGGKFSNS IYKISGGLHG VGLSVVNALS SKLEVEVMRD GKIFYQGYEK GKPVMPLTVR GETDETGTKI RFYPDSEIFE TTKFDYDIVA NRLRELAFLN PNVTIELRDE RTGKSNVFKY EGGLLEFIEY LSKGKEILHE PIYMRREEEN LIVEIVMQYN SGYDELILSY ANNIHTIEGG THVTGFRTAL TRVVNNFARN WGLWKENESL SGDDVREGLT AIVSVKVPDP QFEGQTKTKL GNTEVRKFVE KVVEEELTEY FSENPEVGKL IISKIIEAYR ARQAARKARE LVRRKSLLES SLLPGKLADC SERDPEKCEL FIVEGESAGG SAKQARDRRY QAILPLRGKI LNVEKAQHLT KILSSEEIKA IIASLGTGIG QDFDLSKLRY HKIIIMTDAD VDGAHIRTLL LTFFYRHFRP LIEGGYIYIA QPPLYLLKKG KEERYAYSEE EKEEILREWG YPDNVYIQRY KGLGEMDPEQ LRETTMDPQK RILLQVTIED ALEAERLFSI LMGNNVEERR SFIEQKAKFV RNLDI
|
| |