Gene Dtur_1526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_1526 
Symbol 
ID7081961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp1537733 
End bp1539823 
Gene Length2091 bp 
Protein Length696 aa 
Translation table11 
GC content35% 
IMG OID643458635 
ProductDNA topoisomerase I 
Protein accessionYP_002353414 
Protein GI217967908 
COG category[L] Replication, recombination and repair 
COG ID[COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I 
TIGRFAM ID[TIGR01051] DNA topoisomerase I, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000864041 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAACG AAAAATTAAT CATTGTAGAA TCACCTGCAA AGGCTAAGAC TATAGAGAAG 
ATTCTTGGAA AAGAGTTTAA GGTTTTGGCT TCTTATGGAC ATATAAGGGA TCTACCAGAA
AAGGAACTTG GAGTTGATAT AGAGAATAAT TTTAAACCCA AGTATGTGCT TTTACCTTCT
CGAAAGAAAA TTATTGATAC TATTAAGGAT TTGTCAAAAA AGGCAGAAAA GTTGTATCTC
GCTACAGATC CTGATAGAGA AGGGGAAGCT ATTGCTTGGC ATTTAGTAGA AGAATTAAAG
CTTCCGAAGG AAAAATTTAC ACGAATAGAG TTTCATGAAA TAACTCCAAG GGCAATTCTT
GAAGCAATAA AGAATCCAAG AGAAATAGAT CTAGATAGAG TTGAGGCTCA GCAAGCGAGA
AGAATTCTTG ATAGGCTTGT GGGGTACGAG TTGAGTCCAC TACTTTGGGA AAAAGTAAGA
AAAGGACTTT CTGCTGGCAG AGTTCAATCG GTGGCTCTTA GGTTTATATG TGAGAGAGAA
GAAGAAATTG AAAAATTTAT TCCTGAAGAG TATTGGTATA TATATGGAGA ATTTAGAGAT
GAAGAAAAAG TGCTATATGG AAAGCTTATT TTATATAAAG ATGAAGAGGT AAATGTTAAA
AATGAACAGG AAGTAAATAA GATCATTAGA ATATTAAATT GTCTTGATTA TAGAATTGAC
AAAGTTGTAA TAAAAGAAGA GAAAAGAACA CCACCGCCTC CTTTCATAAC CAGTACTCTT
CAACAAGAGG CTTCAAAGAG GTTTGGTTTT CCTGTAGGAA AGACTATGAA GATAGCCCAA
TCTCTTTATG AGGGAGTTGA TATAGGGAAT GAGAGAATCG GGCTTATAAC CTATATGAGG
ACTGATTCTA CAAGAATTGC TCCTGAGGCA AGAGAGGAAG CTGTTCAATA TATTGAATCG
GGCTTTGGAA AAGAATATGT GGGTAAGGAG CATAAGGAAA AGAAAAAATT AGGGGTACAG
GATGCTCATG AAGCCATAAG ACCTACTTCT GTATTTAGGG ATCCTGAAAA AATTAGGAAA
TATTTAACTG ATGAGCAATT TAAGATATAC AAGCTCATAT GGGAAAGATT TATAGCAAGC
CAGATGAATC ATGCAATATT TGAGGTGGTG GAGATCTACA TAAAAGGTGG AGATTATGTA
TTTCTTTCTA AGGGTAAGAA GCTGAAATTT GCAGGATTTA TGTCTCTTTA CATGGAGAAA
GAAGAGAATG GAGAGGAAAA AGATGAAGTT AATATAGATT ATGTACCTGA GGAGGGAAAG
AACGTAAAAC TGACAACTCT TATCCCAAGG CAATTTTTTA CAGAACCTCC TCCAAGATAT
ACTGAAGCAA CTCTTGTTAG GACTCTTGAA AAATATGGTG TTGGACGGCC AAGTACCTAT
GCTACAATAA TTGAGACTTT AAAAGAACGA AAATACGTAG AGGTTAAAGA TAGAACTCTT
GTTCCAACAA CCCTTGGAAA GGTGGTAAAT GACTTTTTGA CAAAGCAATT TCCTCACCTT
ATTGATGTAA AATTTACTGC AAGGATGGAG GAGGATTTAG ATAAGATAGA AAGTGGGAAG
GTAAAGGCAA TTGAAGTGTT GAAAAAGTTT TATCCAGCTT TTAAAGAAGA GCTTGAAAAA
GTATCAAAAA ATATTGGAAA AATTCAAGTG ATAGAAAAAA CTGATGAGAT TTGTCCTCTT
TGTGGTAGTA AGTTGGTTAT AAGAGAGAAT AAAAATGGAA AGTATTATGC TTGTTCACGA
TATCCTGAGT GTAAATACAC AAAACCTATA TATGAAGAGG CTCAAGGTAG ATGTCCACTA
TGTGGTGGGG TTGTGGTAAA GAAAAAAGCA AAAAAGACAA AAAAGACTTT TTGGGGTTGT
ATAAATTATC CTGAGTGTAG CTTTGCATCC CCTTATGAAC CATTAAATGA AAAATGCCCT
CAGTGTGGAA GCACCATGCT TAAGGGGAAC GGATTTAAGA AATGCAGTAA TAAAGATTGT
AATTATATTG TATGGACAGG GAGGAGAAAG AGATGGAAAA AGTCAAAATA A
 
Protein sequence
MDNEKLIIVE SPAKAKTIEK ILGKEFKVLA SYGHIRDLPE KELGVDIENN FKPKYVLLPS 
RKKIIDTIKD LSKKAEKLYL ATDPDREGEA IAWHLVEELK LPKEKFTRIE FHEITPRAIL
EAIKNPREID LDRVEAQQAR RILDRLVGYE LSPLLWEKVR KGLSAGRVQS VALRFICERE
EEIEKFIPEE YWYIYGEFRD EEKVLYGKLI LYKDEEVNVK NEQEVNKIIR ILNCLDYRID
KVVIKEEKRT PPPPFITSTL QQEASKRFGF PVGKTMKIAQ SLYEGVDIGN ERIGLITYMR
TDSTRIAPEA REEAVQYIES GFGKEYVGKE HKEKKKLGVQ DAHEAIRPTS VFRDPEKIRK
YLTDEQFKIY KLIWERFIAS QMNHAIFEVV EIYIKGGDYV FLSKGKKLKF AGFMSLYMEK
EENGEEKDEV NIDYVPEEGK NVKLTTLIPR QFFTEPPPRY TEATLVRTLE KYGVGRPSTY
ATIIETLKER KYVEVKDRTL VPTTLGKVVN DFLTKQFPHL IDVKFTARME EDLDKIESGK
VKAIEVLKKF YPAFKEELEK VSKNIGKIQV IEKTDEICPL CGSKLVIREN KNGKYYACSR
YPECKYTKPI YEEAQGRCPL CGGVVVKKKA KKTKKTFWGC INYPECSFAS PYEPLNEKCP
QCGSTMLKGN GFKKCSNKDC NYIVWTGRRK RWKKSK