| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtur_1397 |
|---|
| Symbol | |
|---|
| ID | 7081749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dictyoglomus turgidum DSM 6724 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011661 |
|---|
| Strand | - |
|---|
| Start bp | 1411383 |
|---|
| End bp | 1413260 |
|---|
| Gene Length | 1878 bp |
|---|
| Protein Length | 625 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 643458506 |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_002353285 |
|---|
| Protein GI | 217967779 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.477297 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTTC TTAACGAGTT AAATAAAGAG CAATTAGAGG CTGTTTTTGA GATAGAAAGA
CCTGTTCTAA TCTTAGCAGG TGCTGGTTCT GGAAAAACCA GAGTTATTAC CTATAAGATA
GCTTATTTGA TAAAAAATAA TTTTGCTAAG CCCGAAAATA TTGTTGCACT GACTTTTACA
AATAAAGCAG CAGAGGAAAT GAAGCGAAGA ATAGATAACC TGTTAGGGGT GAAGAATGTA
GATAAAGTTT GGGCAGGTAC TTTTCATGGA TTTGGCTTGT ATCTCCTTAA AAATTTTGGT
AGATATTGGA ATCTATGTCC TAATTTTGTA ATCTATGATG AGAATGATCA GGAAGATTTG
ATAAAAGATA TTTTAAAAGA TCTAAATAGA TCAAAAGAAT ATAGTGCAAG AGACATAAAG
GAAAAGATAT CCCGATTAAA GGATCAGTTG ATTACTCCCC AAGAATTTTC TAATATTATT
TCTAATTCTT TTGATGAAAT AGTTTTAGAA GTGTATAAAA AGTATGAGAA AGAATTAAGA
AAAAATAATG CTCTGGATTT TGCTGATTTA CTCTTATATT CTATAAATTT GCTTTATGAG
AAGCCAGCTA TATGTGGCTT TTTACAAGAT AAGATTGAAT ATGTGTTGGT GGATGAGTAT
CAAGATACTA ATAAAGCCCA GTATGAACTA TTTAAAATAA TTGTCCTTGA TAAGCAAAAA
TTTTCAGTAG TAGGAGATGA CGACCAAAGC ATATATAGCT TTAGAGGTGC AGATTATCAG
AATATATTTA AACTTGAAAA GGATTTTAAA AATTTAAAGA TTATTTTTCT GACCAAAAAT
TACAGGTCGA CTCAGCAGAT ACTTGAAATT GCAAATGCTC TTATTGCTAA TAATGATAAG
CGATATCCAA AAGAGTTGTG GAGTGATAAA AGAGATGGTA CTTATCCCAT ACTTTTTAGG
GCACTAAACG AAGAGGATGA GGCTAATTTT GTTATACGTC AAATAAGGCT TGAGTTAGCA
AAAGGGAGGA AATTGTCTGA AATAGCTATA CTGTATAGGA CTAATCGTCA ATCAAGGCCT
TTCGAGGAAG CCTTGATAAG AAATAATATA CCCTATAAAG TAATAGGAGG ACTGAGTTTT
TTTGATAGAA AAGAAGTAAA GGACATAGTA GCCTATTTAA ATATAATTTA CAATCCCAAC
GATTTAATAA GCTTAAAGAG AATAATTAAT GTTCCAAAAA GAGGAATAGG CGAAGCTACT
TTTAATATGA TAAGAGAATA CTATAACAAA GGCTACTCTT TGTTGGAGGC AATAGGAGAA
GTTTCAAGAA TTAAGAGAGA AGTTAAATCT TTTTACGATC TTTGGAAGTA TTTCTTGGAT
TTAAAAAGTA GTTTGAATAT AAGAGAGCTA ATTGCTACTA TTATTGACAA GACCAATTAT
TTATCAGAGT TTCAGAACCA AGGAAAAGAG GAATTAACAA TTAGAATGGA CAATCTAATG
GAACTGATGG ATTTTGCAGA TAATTTTCCA GGTAAAACAC AAGATACCTT AGGAGATTTT
CTAAGTCATC TGAGTTTGAC TAGTAGTAAA CTTGAAAGTA GTTTAGAAGA AGGAAAGGTA
TCACTAATAA CTCTTCATAG TGTGAAGGGG TTGGAATTTG AAGTAGTCTT CCTAGTTGGT
ATGGAAGAAG GTCTATTACC CCATTACAAC GCAGCTACAA GGGAAGAAAT ACAGGAAGAA
AGAAGGTTGT GTTATGTAGG AATAACAAGA GCAAAAGAAA AACTTTATCT TTCTTATGCT
GTAAAGAGAT ATAATAGATA TCAAGAACCC TCAAGATTTA TTGAGGAGAT TAGTCATCTT
TTAAGTGTTA AAAAATAG
|
|---|
| Protein sequence | MDFLNELNKE QLEAVFEIER PVLILAGAGS GKTRVITYKI AYLIKNNFAK PENIVALTFT
NKAAEEMKRR IDNLLGVKNV DKVWAGTFHG FGLYLLKNFG RYWNLCPNFV IYDENDQEDL
IKDILKDLNR SKEYSARDIK EKISRLKDQL ITPQEFSNII SNSFDEIVLE VYKKYEKELR
KNNALDFADL LLYSINLLYE KPAICGFLQD KIEYVLVDEY QDTNKAQYEL FKIIVLDKQK
FSVVGDDDQS IYSFRGADYQ NIFKLEKDFK NLKIIFLTKN YRSTQQILEI ANALIANNDK
RYPKELWSDK RDGTYPILFR ALNEEDEANF VIRQIRLELA KGRKLSEIAI LYRTNRQSRP
FEEALIRNNI PYKVIGGLSF FDRKEVKDIV AYLNIIYNPN DLISLKRIIN VPKRGIGEAT
FNMIREYYNK GYSLLEAIGE VSRIKREVKS FYDLWKYFLD LKSSLNIREL IATIIDKTNY
LSEFQNQGKE ELTIRMDNLM ELMDFADNFP GKTQDTLGDF LSHLSLTSSK LESSLEEGKV
SLITLHSVKG LEFEVVFLVG MEEGLLPHYN AATREEIQEE RRLCYVGITR AKEKLYLSYA
VKRYNRYQEP SRFIEEISHL LSVKK
|
|---|
| |