| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtur_1365 |
|---|
| Symbol | |
|---|
| ID | 7081709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dictyoglomus turgidum DSM 6724 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011661 |
|---|
| Strand | + |
|---|
| Start bp | 1379149 |
|---|
| End bp | 1380420 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 643458466 |
|---|
| Product | diaminopimelate decarboxylase |
|---|
| Protein accession | YP_002353253 |
|---|
| Protein GI | 217967747 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0019] Diaminopimelate decarboxylase |
|---|
| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00386973 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATA AAGTATATCC TATAACCTTT AAGAAGGATG AAGACTATAA AATAGGAGGA
GTAAGTATAC CTTATTTAGG AGAAAAATAT GGAACTCCTC TTTATATATT AGACAAGGAA
ACACTGATTT TTCAGGCTCA AAAATATATA AACTCTTGGA AAAAATATTA CAAAAACAAA
TATAAGGTAT TATTTGCAAT AAAAGCTCTG CCTATTTTAG AAGTCATTAG AATATTTAAA
AATTATGGTT TAGGAGCTCT TGTTTCTACA GGGGGAGAAC TGTATATAGC CTTAAGTGCT
AATGTACCAT CTGAAGACAT ATACTTCCAT GGAAATGCAA AAACTCTAAA GGAGATTGAA
TATGCCATCG ATCAGAAGGT TGGAGCAATA ATTATAGATA ACTTTGATGA ATACGAAAAG
ATAAAATATG TATTGTCTAA AAAAGATACA AAAGTAAAAG TATTGGTAAG GATCATACCT
AATATAGAAG TTAATACCCA TAAATCTATC CGTACGGGGC AAACGGACAC TAAGTTTGGC
TTACCCATAG AGCAGGCTTT AGTGCTCATA GAAAAAATAA ATACGGAAAA AAACATAATT
TTTAAGGGAA TACATTCCCA TATAGGATCC CAGATATTTG ATATCTCAGC ATATGTTAAA
CTTTCCGAAG TATTAAGCGA AGTATATAAA GAGCTAAATA GTAAAAACAT AACTGTAGAA
GAGATGAGTA TAGGTGGTGG ATTAGGAGTA GCCTATACAA AAGAGGATAA TCCCCCTGAC
ATAGAGGACC TTGCCCGAGA AGTATCAAAT AAATTTAGTG AGACTATTGG GCATAATTTC
AAATTAATCT GTGAGCCAGG AAGATCTCTT GTAGGTAGAG CAGGAATTAC TCTTTATAGA
ATTGAGAGTA GGAAAGAACT TGGCATAAGA AAATATGTTT CGGTAGACGG AGGAATGTCA
GATAATATAA GACCATCTCT ATACGGAGCA AAATATTCGG CCCTAATTAT AACTAAAGGA
GATAGGGAAG AAATTTTTTC CATAGCAGGA AAGCATTGTG AATCAGGAGA TATTTTAATA
AAAGACTTTT CGGGTTTATG GCCTAATCCT GGAGATTATT TAATAACCTT TACAACTGGT
GCCTACAACT TTTCCATGTA TACGTGGTAC AATGCTACTC CAAGACCTGC AGTAGTATTA
GTAGAAAATG GGAAAGATAG GATTATAGTA AAAAGAGAAA ATTATGAGGA CCTATTAGGG
GGACAGATAT GA
|
|---|
| Protein sequence | MENKVYPITF KKDEDYKIGG VSIPYLGEKY GTPLYILDKE TLIFQAQKYI NSWKKYYKNK
YKVLFAIKAL PILEVIRIFK NYGLGALVST GGELYIALSA NVPSEDIYFH GNAKTLKEIE
YAIDQKVGAI IIDNFDEYEK IKYVLSKKDT KVKVLVRIIP NIEVNTHKSI RTGQTDTKFG
LPIEQALVLI EKINTEKNII FKGIHSHIGS QIFDISAYVK LSEVLSEVYK ELNSKNITVE
EMSIGGGLGV AYTKEDNPPD IEDLAREVSN KFSETIGHNF KLICEPGRSL VGRAGITLYR
IESRKELGIR KYVSVDGGMS DNIRPSLYGA KYSALIITKG DREEIFSIAG KHCESGDILI
KDFSGLWPNP GDYLITFTTG AYNFSMYTWY NATPRPAVVL VENGKDRIIV KRENYEDLLG
GQI
|
|---|
| |