Gene Dtur_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_1236 
Symbol 
ID7082718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp1255136 
End bp1256188 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content30% 
IMG OID643458334 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_002353128 
Protein GI217967622 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA GCAAGATTGA AGAAAGATGG AAAGTACTTA CTGAGAATGT TCAACTTGGT 
ATCCTTATTG TGGATAAGGA TGGTGTTGTA GTTTTTGCCA ACAATAAGAT AAAAGAGCTA
TTTGATATTC AAAATAATAG TAAGAATAAT AGAAAACTTA TAGAGTTAAT ACCTGACTAT
GAAATTGATG ATCTTTACAA AAAAACTCTT GAAAGTAAAA CATATAATAA AACCAGTTTA
AATTTTTGGG GAAAGGAAAA GAAATATCTT GAGGTTGAGG CTTTTTATCT AAGTGGAAAT
CAAGAGGTTT TATTGATTAT TAATGATTAT ACCCCTCTTC ATAGAATGGA AGAGAATTTT
AAAGAGTTTC TTGGAAATGC CTCTCATGAG TTAAGGACTC CTTTAACGTC GATCCAAATA
TTAATTGATT TGTTTTCTGA AAAAAAGATT ACTCTAGATG AAATATACAA TGAGTTTTTT
CCACATTTGA GAAAAGAAGT GGAAAGGATG TCAAAACTTG TGAGTAATTT ATTAAATCTG
TCTAGACTTG AAGCAGGAGT GATAGACTTA CAGCTTAAAG AGGTAAATCT TACGGAAATA
GTAATGGAGG TTATAGATAG ATTAACTCCA CATATTTCTA AGAAAAATTT AGAAGTAAAT
TTGAAAATTC CTGAGAAGCT CGTTATAAAT GCTGATCCTC AACACCTTGA TACTATAGTT
TTTAACATTG TTGAGAATGC AGTAAAATAT ACTCCTCAAG GGGGGTTAAT AGAAATAGGG
GTCAATGAAA ATGAGGACAA TGTAATTCTC TGGATTAGAG ATACTGGTAT TGGAATACCT
GAAAAAGACT TAAATAGAAT TTTTGACAGG TTTTATAGAG TTAGTAAGTC AAGGACTAAT
GAAGATGGAT TTAGTACAGG CTTGGGACTT TCTATAGTAA AAAAATTAAT TGAAAGGCAT
GGGTGGACTA TTAGAGTAGA AAGCAAAGTT AATAAAGGAA CAAAGTTTGA GATTATAATC
CCTAAAAGAA AGGAAGGAAT AGAAAATGGT TAA
 
Protein sequence
MKISKIEERW KVLTENVQLG ILIVDKDGVV VFANNKIKEL FDIQNNSKNN RKLIELIPDY 
EIDDLYKKTL ESKTYNKTSL NFWGKEKKYL EVEAFYLSGN QEVLLIINDY TPLHRMEENF
KEFLGNASHE LRTPLTSIQI LIDLFSEKKI TLDEIYNEFF PHLRKEVERM SKLVSNLLNL
SRLEAGVIDL QLKEVNLTEI VMEVIDRLTP HISKKNLEVN LKIPEKLVIN ADPQHLDTIV
FNIVENAVKY TPQGGLIEIG VNENEDNVIL WIRDTGIGIP EKDLNRIFDR FYRVSKSRTN
EDGFSTGLGL SIVKKLIERH GWTIRVESKV NKGTKFEIII PKRKEGIENG