Gene Dtur_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_1080 
Symbol 
ID7083023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp1100576 
End bp1101781 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content36% 
IMG OID643458164 
Productaminotransferase class I and II 
Protein accessionYP_002352973 
Protein GI217967467 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID[TIGR03540] LL-diaminopimelate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.695177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAAA AGGCAAAAAG AATTGAAAAT CTTCCTCCTT ATCTATTTGC CCGTATAGAT 
CAGCTAAAAG AAGAGGCTAT AAATAGAGGT ATAGATGTGA TTAGTCTTGG GATTGGTGAT
CCTGATCAGC CTACACCGAT GCCTATAGTA CAAAAATTAT GTGAGGAGGC CTTAAATCCT
GCTAATCATA GATATCCATC CTACGAAGGC CTTTTGGAGT ATCGTCAGGC GGTAGCAAAC
TGGTATAAAT ATAGATTTAA CGTAGATCTT GATCCTAAAA AGGAAGTATT GTCTCTTATA
GGATCCAAAG AAGGATTAGT ACATATGATA TGGGGCCTTG TGGATAGAGG AGATATAGTT
CTGTGTCCAG ATCCTGGATA TCCTGTGTAC AGAATTTCTA CTCTTCTTGC TGAAGGAGAA
CCTTATTCTA TTCCCCTTAA AATTGAGAAT AAATTTCTTC CAAAGTGGGA AGATATTCCG
ACCGAGATTG CTAAAAAAGC TAAAGTTATG TTTTTGAACT ATCCTAGTAA TCCCACGGGT
GCAGTTATAG ACAAAAAAGG ATTAGAAGAA GCTGTAAAAT TTGCCAAAGA ATACGATATT
ATTATTTTAT ATGATAATGC CTATTCAGAA ATAACTTTTG ACGGCTTTGT GGCTCCTTCT
ATTCTTGAAA TTGATGGTGC TAAGGATATT GCTATAGAAT TTAACTCTTT GTCAAAGACT
TTTAATATGA CTGGGTGGAG AATAGGCTAT GCAGTGGGAA ATGCAGATTT GATCTCTGTA
CTCTCAACAG TGAAAACCAA TGTGGATTCA GGGGTTTTTC AAGCAATCCA ATATGCTGCT
ATTGAGGCTT TAAATAATTT AAGAGATTTT TCAAAAGAAA GTGTGAAAAT TTATCAAAGA
AGAAGGGACA TGGTACTTGA TGCCTTCAAA GGTATGGGAG TTGAGATATT ACCTCCCAAG
GGTACTTTTT ATGTATGGGT ATCTGTTCCA GAAGGATTCA CTTCTACAGA TTTTGCAGCG
TTTCTCTTGG AGGAGATTGG AGTGCTGGTG GTACCTGGAA TTGGTTATGG TGATTATGGA
GAAGGATATA TAAGAATTTC TACAACTATA AGTGAGGATC GATTAATAGA GGCATTGAAA
AGAGTTAAAG AATTTTTTGG GAGGGATGAT TGGAAATCGA AAAAGCCATC CTTGTTGCTA
AAATAA
 
Protein sequence
MIKKAKRIEN LPPYLFARID QLKEEAINRG IDVISLGIGD PDQPTPMPIV QKLCEEALNP 
ANHRYPSYEG LLEYRQAVAN WYKYRFNVDL DPKKEVLSLI GSKEGLVHMI WGLVDRGDIV
LCPDPGYPVY RISTLLAEGE PYSIPLKIEN KFLPKWEDIP TEIAKKAKVM FLNYPSNPTG
AVIDKKGLEE AVKFAKEYDI IILYDNAYSE ITFDGFVAPS ILEIDGAKDI AIEFNSLSKT
FNMTGWRIGY AVGNADLISV LSTVKTNVDS GVFQAIQYAA IEALNNLRDF SKESVKIYQR
RRDMVLDAFK GMGVEILPPK GTFYVWVSVP EGFTSTDFAA FLLEEIGVLV VPGIGYGDYG
EGYIRISTTI SEDRLIEALK RVKEFFGRDD WKSKKPSLLL K