| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtur_1077 |
|---|
| Symbol | |
|---|
| ID | 7083020 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dictyoglomus turgidum DSM 6724 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011661 |
|---|
| Strand | + |
|---|
| Start bp | 1095323 |
|---|
| End bp | 1097884 |
|---|
| Gene Length | 2562 bp |
|---|
| Protein Length | 853 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643458161 |
|---|
| Product | DNA mismatch repair protein MutS |
|---|
| Protein accession | YP_002352970 |
|---|
| Protein GI | 217967464 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
|---|
| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAATA TGACTCCTTT ATATAGGCAA TATAAGTCCA TAAAAGATCA ATTTTCCGAC
GCTATTCTTC TTTTTAGGTT GGGAGATTTT TATGAGGCTT TTGAAGAAGA TGCAAAGATA
ATCTCTCAAG AGCTTGATAT TGTGTTAACT TCCAAAGAGA TTGGTAAGGG CAAAAGAATC
CCTATGGCTG GGGTTCCCTA TCATTCCTTG GATAGCTATT TGTCTAAATT AGTACAAAAG
AAGTATAAGG TGGCAATTTG CGAACAAGTC GAAGATCCAG CATTAGCAAA AGGTCTTGTG
AGAAGAGAAG TAGTAAGAGT CATTACACCA GGGACTTTAG TAGAGGATAC ATTACTTGAG
GATAAAAACA ACAATTTCCT TTCTTCAATT TATGCTTTGA ATAGAGAATA TTTAGCTCTT
GCTACTATTG ATGTCTCTAC GGGGGAGTTT TTTGCTACTG AATGGAGAGG AAAGGATGCA
GAGGAAATAA TTTATTCTGA ATTGGTTAGG TTAAAGCCTA AGGAGATAAT ATTACCCTTT
TCATTAAAAG ATCTTCTCTC AGAGTTATTA AGTGATCTAA AAAGAGAGGT AGATCCCAAA
ATTACTCTTT TAGAAGATAG TTATTTTGAG CCTTCAGATC ATCAAATTAG TTATTCTGAA
CCAGAAGAGA ACTATCCTCT TGCTGAGAAG TCTATAAATG GGGTTTTAAG CTACATAAAA
GAAGTAATGT TTACTATTCC TACCCACATT GAGAGGGTAG AATTTTATAA ACCTCAGCAA
TATTTGATCC TTGATAGTAC TGCAATAAAA CATTTAGAGC TTCTTGAGAC AGTAAGAGAA
GGACAAAGAA GAGGAAGTCT AATATGGGTA CTTGATAAGA CTTTGACTTC CATGGGAGCA
AGACTTCTAA AAAAATGGCT CTTGCAACCT CTTTTAAATG TGAATGCCAT AAAAAAGAGG
CAAGAAGCTA TAAAGGAGTT CTTAGACAAG GATCCTTGGA GAAGAGAAAT GGAAGAGATA
CTAAAAGAGA TGCCAGATCT TGAGAGGATA AACTCAAGAA TAAATTATAA TACTGCGACT
CCAAAGGAAT TAATATATCT AAGACAAGCT TTATCTTTTT TACCCTTATT GAGAAAGTCC
CTTGAAAAAG CAGAGTCCAA CAGATTGAAG GAGCTGAAAG AAAACTTACC TAATCTTGAA
CCTTTATACG AAGAGCTTGA TAGAGCTCTT GTAGAAAGTC CTCCTTCTCA TATCAAAGAT
GGAGGATATA TAAAAGATGG TTATGATCCA AATCTTGATG AGCTGAGGAA ACTTCTAAGA
GAAAGTAAAG ATTGGCTAAT TAACCTTGAG AACCGAGAAA GAGAAAGAAC GGGTATAAAA
TCTCTCAAGA TTGGATATAA TCAAGTTTTT GGCTATTACA TAGAGGTAAC AAAGGCGAAT
TTAAATTTGG TTCCTTCGGA TTATATAAGA AAGCAGACCC TAGTCAATGC AGAAAGATTT
ATTACGCCAG AGTTAAAAGA GTGGGAGAAT AAAATCCTTC ATGCGGAGGA TAATATTAAA
AAAATAGAAG AAGAACTCTT TCAAAATCTA AGAAAGAAGG TTATTAAACA TTCTAAGGAC
ATTACCACTT TTGCTCAGAC CATCGCGGAG ATTGATGTGT ATATATCTCT TGCTAAGGCA
GCAAGGGAGT ATAATTATGT GTGTCCTCAA ATTACTAATG ATTATGAGGT AATAATAAGA
GAGGGAAGAC ATCCAGTAAT TGAAAGAATG CTTCCTCCAG GAACTTTTGT ACCTAACGAT
GCTTATCTTA ACAAAGACAA GTTTATTGAT CTAATAACAG GACCTAATAT GGCTGGAAAG
TCCACCTATA TAAGACAGAT TGCTTTAATC ATTATCCTTG CTCAAATGGG TTCTTTTATT
CCGGCCAAAG AGGCAAAAAT TGGAGTGGTA GACAGGATCT TTACAAGAAT AGGAGCATGG
GATGATATAT CCTCTGGGGA AAGCACTTTC CTTGTGGAGA TGAAGGAGGT TGGAAACATA
CTTTCTCATG CTACAGAAAG AAGTTTAATA ATTCTTGATG AAGTGGGTAG AGGAACCAGC
ACCTACGATG GAATAAGTAT TGCATGGGCT ATAGTGGAGT ATATCCATAA CAAAATAAAG
GCTAAAACTC TTTTTGCTAC TCACTATCAT GAACTTACAG AGCTTGAAAA AGAGCTAAAA
CATCTTAAAA ATCTTAGCGT AGCAGTACAG GAAAAAGGTA AAGACATAAT CTTTTTACAC
AAAATAGCGG AAAAACCAGC TGATAAAAGC TATGGAATCT ACGTAGCTCA ACTTGCAGAC
CTACCGAAAG AGGTCATTGA GAGAGCAGAA AAGATTTTGT TTGAACTTGA AAAGGGAAGG
GAAATTAAGA AGAAAGAAAT TGTACAACTT CCGCTGTTCT CAGAGATTAC TGATTCTAAG
CTTGAAAAAT TAAAAAATGA AATTCTATCT TTAAATACTA ATGAGCTTAC TCCAATCCAG
GCTCTTTTAA AAATCCATGA ATGGAAGGAA CTTATAAAGT AA
|
|---|
| Protein sequence | MENMTPLYRQ YKSIKDQFSD AILLFRLGDF YEAFEEDAKI ISQELDIVLT SKEIGKGKRI
PMAGVPYHSL DSYLSKLVQK KYKVAICEQV EDPALAKGLV RREVVRVITP GTLVEDTLLE
DKNNNFLSSI YALNREYLAL ATIDVSTGEF FATEWRGKDA EEIIYSELVR LKPKEIILPF
SLKDLLSELL SDLKREVDPK ITLLEDSYFE PSDHQISYSE PEENYPLAEK SINGVLSYIK
EVMFTIPTHI ERVEFYKPQQ YLILDSTAIK HLELLETVRE GQRRGSLIWV LDKTLTSMGA
RLLKKWLLQP LLNVNAIKKR QEAIKEFLDK DPWRREMEEI LKEMPDLERI NSRINYNTAT
PKELIYLRQA LSFLPLLRKS LEKAESNRLK ELKENLPNLE PLYEELDRAL VESPPSHIKD
GGYIKDGYDP NLDELRKLLR ESKDWLINLE NRERERTGIK SLKIGYNQVF GYYIEVTKAN
LNLVPSDYIR KQTLVNAERF ITPELKEWEN KILHAEDNIK KIEEELFQNL RKKVIKHSKD
ITTFAQTIAE IDVYISLAKA AREYNYVCPQ ITNDYEVIIR EGRHPVIERM LPPGTFVPND
AYLNKDKFID LITGPNMAGK STYIRQIALI IILAQMGSFI PAKEAKIGVV DRIFTRIGAW
DDISSGESTF LVEMKEVGNI LSHATERSLI ILDEVGRGTS TYDGISIAWA IVEYIHNKIK
AKTLFATHYH ELTELEKELK HLKNLSVAVQ EKGKDIIFLH KIAEKPADKS YGIYVAQLAD
LPKEVIERAE KILFELEKGR EIKKKEIVQL PLFSEITDSK LEKLKNEILS LNTNELTPIQ
ALLKIHEWKE LIK
|
|---|
| |